Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.57□□□□□ -1.68
NEK3P51956 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NEK3P51956 AC008638.3-201ENST00000603341 463 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AC105129.3-201ENST00000605455 485 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AC012360.2-201ENST00000609349 391 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AL590282.1-201ENST00000610379 1136 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AL590099.1-201ENST00000615276 138 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AL161637.1-201ENST00000622380 412 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AC091905.2-201ENST00000623143 306 ntBASIC4.57□□□□□ -1.68
NEK3P51956 AC079597.1-201ENST00000624306 508 ntBASIC4.57□□□□□ -1.68
NEK3P51956 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NEK3P51956 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NEK3P51956 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NEK3P51956 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NEK3P51956 MTND4P16-201ENST00000466108 1367 ntBASIC4.56□□□□□ -1.68
NEK3P51956 USP8P1-201ENST00000494673 3183 ntBASIC4.56□□□□□ -1.68
NEK3P51956 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
NEK3P51956 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NEK3P51956 OR11H4-201ENST00000315409 1082 ntBASIC4.56□□□□□ -1.68
NEK3P51956 AC067945.1-201ENST00000342609 618 ntBASIC4.56□□□□□ -1.68
NEK3P51956 MIR448-201ENST00000362131 111 ntBASIC4.56□□□□□ -1.68
NEK3P51956 RNU6-769P-201ENST00000384407 104 ntBASIC4.56□□□□□ -1.68
NEK3P51956 RNU1-44P-201ENST00000384453 163 ntBASIC4.56□□□□□ -1.68
NEK3P51956 SNORD3H-201ENST00000384486 214 ntBASIC4.56□□□□□ -1.68
NEK3P51956 PGBD4P8-201ENST00000412993 562 ntBASIC4.56□□□□□ -1.68
NEK3P51956 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.56□□□□□ -1.68
NEK3P51956 AL356387.2-201ENST00000422272 243 ntBASIC4.56□□□□□ -1.68
NEK3P51956 UBE2V1P13-201ENST00000436983 439 ntBASIC4.56□□□□□ -1.68
NEK3P51956 ELOCP8-201ENST00000439309 332 ntBASIC4.56□□□□□ -1.68
NEK3P51956 AC069285.2-201ENST00000440210 275 ntBASIC4.56□□□□□ -1.68
NEK3P51956 UBE2D3P4-201ENST00000441973 436 ntBASIC4.56□□□□□ -1.68
NEK3P51956 ELOCP15-201ENST00000442090 332 ntBASIC4.56□□□□□ -1.68
NEK3P51956 UBDP1-202ENST00000457888 382 ntBASIC4.56□□□□□ -1.68
NEK3P51956 HMGB1P36-201ENST00000487709 576 ntBASIC4.56□□□□□ -1.68
NEK3P51956 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.56□□□□□ -1.68
NEK3P51956 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.56□□□□□ -1.68
NEK3P51956 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.56□□□□□ -1.68
NEK3P51956 AC013828.2-201ENST00000532487 235 ntBASIC4.56□□□□□ -1.68
NEK3P51956 AC069240.1-201ENST00000548774 375 ntBASIC4.56□□□□□ -1.68
NEK3P51956 AC023161.2-201ENST00000551218 780 ntBASIC4.56□□□□□ -1.68
NEK3P51956 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NEK3P51956 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.56□□□□□ -1.68
NEK3P51956 AF131215.7-201ENST00000602443 707 ntBASIC4.56□□□□□ -1.68
NEK3P51956 AP000403.1-201ENST00000603349 851 ntBASIC4.56□□□□□ -1.68
NEK3P51956 AL139395.1-201ENST00000603662 160 ntBASIC4.56□□□□□ -1.68
NEK3P51956 AC090948.1-201ENST00000607464 549 ntBASIC4.56□□□□□ -1.68
NEK3P51956 MIR6758-201ENST00000620653 63 ntBASIC4.56□□□□□ -1.68
NEK3P51956 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NEK3P51956 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NEK3P51956 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NEK3P51956 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NEK3P51956 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
NEK3P51956 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
NEK3P51956 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.56□□□□□ -1.68
NEK3P51956 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
NEK3P51956 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NEK3P51956 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.56□□□□□ -1.68
NEK3P51956 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NEK3P51956 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NEK3P51956 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NEK3P51956 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NEK3P51956 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NEK3P51956 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.55□□□□□ -1.68
NEK3P51956 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
NEK3P51956 AC018529.3-201ENST00000624212 2254 ntBASIC4.55□□□□□ -1.68
NEK3P51956 RPL32P3-201ENST00000359025 275 ntBASIC4.55□□□□□ -1.68
NEK3P51956 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.55□□□□□ -1.68
NEK3P51956 RNU1-63P-201ENST00000383902 164 ntBASIC4.55□□□□□ -1.68
NEK3P51956 SNORD116-2-201ENST00000384274 95 ntBASIC4.55□□□□□ -1.68
NEK3P51956 SNORD116-6-201ENST00000384711 96 ntBASIC4.55□□□□□ -1.68
NEK3P51956 RNU2-47P-201ENST00000410649 186 ntBASIC4.55□□□□□ -1.68
NEK3P51956 UBTFL3-201ENST00000418934 1024 ntBASIC4.55□□□□□ -1.68
NEK3P51956 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.55□□□□□ -1.68
NEK3P51956 AC109583.1-201ENST00000432156 268 ntBASIC4.55□□□□□ -1.68
NEK3P51956 RPL37P21-201ENST00000435890 276 ntBASIC4.55□□□□□ -1.68
NEK3P51956 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.55□□□□□ -1.68
NEK3P51956 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.55□□□□□ -1.68
NEK3P51956 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.55□□□□□ -1.68
NEK3P51956 RPS23P7-201ENST00000466210 444 ntBASIC4.55□□□□□ -1.68
NEK3P51956 AC010285.1-201ENST00000470580 392 ntBASIC4.55□□□□□ -1.68
NEK3P51956 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.55□□□□□ -1.68
NEK3P51956 RPL7P23-201ENST00000493874 747 ntBASIC4.55□□□□□ -1.68
NEK3P51956 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.55□□□□□ -1.68
NEK3P51956 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.55□□□□□ -1.68
NEK3P51956 RNA5SP154-201ENST00000516193 111 ntBASIC4.55□□□□□ -1.68
NEK3P51956 IGLVIV-65-201ENST00000517313 360 ntBASIC4.55□□□□□ -1.68
NEK3P51956 MYL12AP1-201ENST00000518490 515 ntBASIC4.55□□□□□ -1.68
NEK3P51956 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.55□□□□□ -1.68
NEK3P51956 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.55□□□□□ -1.68
NEK3P51956 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.55□□□□□ -1.68
NEK3P51956 AC011260.1-201ENST00000578420 472 ntBASIC4.55□□□□□ -1.68
NEK3P51956 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.55□□□□□ -1.68
NEK3P51956 AL590229.1-201ENST00000603497 542 ntBASIC4.55□□□□□ -1.68
NEK3P51956 PRELID3BP8-201ENST00000604148 295 ntBASIC4.55□□□□□ -1.68
NEK3P51956 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NEK3P51956 BCRP9-201ENST00000605312 388 ntBASIC4.55□□□□□ -1.68
NEK3P51956 AL713922.2-201ENST00000619384 716 ntBASIC4.55□□□□□ -1.68
NEK3P51956 AL356266.1-201ENST00000623311 483 ntBASIC4.55□□□□□ -1.68
NEK3P51956 AC007494.3-201ENST00000624660 743 ntBASIC4.55□□□□□ -1.68
NEK3P51956 AC091965.5-201ENST00000624785 342 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms