Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MRE11P49959 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.25□□□□□ -1.57
MRE11P49959 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
MRE11P49959 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
MRE11P49959 RNU6-797P-201ENST00000363101 109 ntBASIC5.25□□□□□ -1.57
MRE11P49959 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
MRE11P49959 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
MRE11P49959 RNU6-297P-201ENST00000384636 107 ntBASIC5.25□□□□□ -1.57
MRE11P49959 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
MRE11P49959 SNORD115-47-201ENST00000391226 86 ntBASIC5.25□□□□□ -1.57
MRE11P49959 ELOCP19-201ENST00000411919 318 ntBASIC5.25□□□□□ -1.57
MRE11P49959 HMGN1P14-201ENST00000412459 517 ntBASIC5.25□□□□□ -1.57
MRE11P49959 OFD1P18Y-201ENST00000420889 959 ntBASIC5.25□□□□□ -1.57
MRE11P49959 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.25□□□□□ -1.57
MRE11P49959 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MRE11P49959 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.25□□□□□ -1.57
MRE11P49959 AL831737.1-201ENST00000441288 271 ntBASIC5.25□□□□□ -1.57
MRE11P49959 YWHAQP9-201ENST00000445891 512 ntBASIC5.25□□□□□ -1.57
MRE11P49959 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.25□□□□□ -1.57
MRE11P49959 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.25□□□□□ -1.57
MRE11P49959 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MRE11P49959 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.25□□□□□ -1.57
MRE11P49959 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.25□□□□□ -1.57
MRE11P49959 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.25□□□□□ -1.57
MRE11P49959 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MRE11P49959 AC074344.1-201ENST00000512823 224 ntBASIC5.25□□□□□ -1.57
MRE11P49959 AF186190.1-201ENST00000517470 480 ntBASIC5.25□□□□□ -1.57
MRE11P49959 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.25□□□□□ -1.57
MRE11P49959 SLC2A13P1-201ENST00000531560 322 ntBASIC5.25□□□□□ -1.57
MRE11P49959 AC124947.2-202ENST00000552735 133 ntBASIC5.25□□□□□ -1.57
MRE11P49959 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.25□□□□□ -1.57
MRE11P49959 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.25□□□□□ -1.57
MRE11P49959 AL512782.1-201ENST00000603093 364 ntBASIC5.25□□□□□ -1.57
MRE11P49959 AL160281.1-201ENST00000605307 311 ntBASIC5.25□□□□□ -1.57
MRE11P49959 AC091834.1-201ENST00000614543 472 ntBASIC5.25□□□□□ -1.57
MRE11P49959 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MRE11P49959 AC103858.2-201ENST00000621471 543 ntBASIC5.25□□□□□ -1.57
MRE11P49959 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
MRE11P49959 AC120349.2-201ENST00000625002 298 ntBASIC5.25□□□□□ -1.57
MRE11P49959 AC112200.1-201ENST00000625015 234 ntBASIC5.25□□□□□ -1.57
MRE11P49959 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
MRE11P49959 AC099654.14-201ENST00000638599 341 ntBASIC5.25□□□□□ -1.57
MRE11P49959 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
MRE11P49959 MTND4P16-201ENST00000466108 1367 ntBASIC5.25□□□□□ -1.57
MRE11P49959 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
MRE11P49959 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MRE11P49959 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
MRE11P49959 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MRE11P49959 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MRE11P49959 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.24□□□□□ -1.57
MRE11P49959 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MRE11P49959 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MRE11P49959 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
MRE11P49959 AC032011.1-201ENST00000611703 1549 ntBASIC5.24□□□□□ -1.57
MRE11P49959 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
MRE11P49959 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.24□□□□□ -1.57
MRE11P49959 OR4K15-201ENST00000305051 1216 ntBASIC5.24□□□□□ -1.57
MRE11P49959 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MRE11P49959 AC019155.1-201ENST00000382242 574 ntBASIC5.24□□□□□ -1.57
MRE11P49959 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MRE11P49959 MIR483-201ENST00000385070 76 ntBASIC5.24□□□□□ -1.57
MRE11P49959 RNU6-248P-201ENST00000410720 107 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.24□□□□□ -1.57
MRE11P49959 USP9YP6-201ENST00000413550 854 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.24□□□□□ -1.57
MRE11P49959 RPL12P34-201ENST00000424532 479 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AC000111.3-201ENST00000433478 193 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AL022238.1-201ENST00000442557 355 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AC244505.5-201ENST00000443639 207 ntBASIC5.24□□□□□ -1.57
MRE11P49959 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.24□□□□□ -1.57
MRE11P49959 PDSS1P2-201ENST00000449397 678 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AC108463.1-201ENST00000450258 347 ntBASIC5.24□□□□□ -1.57
MRE11P49959 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MRE11P49959 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MRE11P49959 USP9YP34-201ENST00000453983 808 ntBASIC5.24□□□□□ -1.57
MRE11P49959 RPL18AP17-201ENST00000455326 198 ntBASIC5.24□□□□□ -1.57
MRE11P49959 RPL7AP52-201ENST00000458096 790 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.24□□□□□ -1.57
MRE11P49959 RPL7P24-201ENST00000493052 752 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AC108941.1-201ENST00000502853 530 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.24□□□□□ -1.57
MRE11P49959 AC022483.1-201ENST00000514020 567 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.24□□□□□ -1.57
MRE11P49959 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.24□□□□□ -1.57
MRE11P49959 AP002748.2-201ENST00000528671 348 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AP001781.1-201ENST00000530977 207 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.24□□□□□ -1.57
MRE11P49959 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.24□□□□□ -1.57
MRE11P49959 AC107016.1-201ENST00000550463 337 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.24□□□□□ -1.57
MRE11P49959 AC091489.2-201ENST00000566263 604 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.24□□□□□ -1.57
MRE11P49959 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.24□□□□□ -1.57
MRE11P49959 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.24□□□□□ -1.57
MRE11P49959 AP000860.1-201ENST00000605250 559 ntBASIC5.24□□□□□ -1.57
MRE11P49959 RNU6-88P-201ENST00000606801 100 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AL354760.1-201ENST00000608357 643 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AC023043.4-201ENST00000612081 449 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AL627230.1-201ENST00000613077 211 ntBASIC5.24□□□□□ -1.57
MRE11P49959 AC027807.2-201ENST00000616099 408 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms