Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL592293.2-201ENST00000422292 996 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AL513174.1-201ENST00000423182 629 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AC087650.1-201ENST00000431445 468 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-1P43699 AC129850.1-201ENST00000436203 508 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.45□□□□□ -1.86
NKX2-1P43699 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-1P43699 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.45□□□□□ -1.86
NKX2-1P43699 SNRPGP5-201ENST00000456003 220 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AC104563.1-201ENST00000476147 376 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX2-1P43699 DSTNP2-201ENST00000504533 515 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 COX7A2P2-201ENST00000505291 250 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-1P43699 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 COX6CP8-201ENST00000522620 226 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-1P43699 HIGD1AP10-201ENST00000527837 282 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-1P43699 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.45□□□□□ -1.86
NKX2-1P43699 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX2-1P43699 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.45□□□□□ -1.86
NKX2-1P43699 SETP7-201ENST00000552169 453 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.45□□□□□ -1.86
NKX2-1P43699 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.45□□□□□ -1.86
NKX2-1P43699 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-1P43699 ACTR3BP3-201ENST00000565577 979 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-1P43699 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-1P43699 AC090615.1-201ENST00000577519 154 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-1P43699 VN1R79P-201ENST00000593540 513 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AF131215.7-201ENST00000602443 707 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AC079587.1-201ENST00000603846 277 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AC128687.1-201ENST00000605304 619 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-1P43699 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 AC007546.1-201ENST00000619452 559 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 C2orf27A-204ENST00000623058 969 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX2-1P43699 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.45□□□□□ -1.86
NKX2-1P43699 AC138649.5-201ENST00000637456 137 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX2-1P43699 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-1P43699 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-1P43699 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-1P43699 BDP1P-201ENST00000582658 1990 ntBASIC3.45□□□□□ -1.86
NKX2-1P43699 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
NKX2-1P43699 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-1P43699 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.45□□□□□ -1.86
NKX2-1P43699 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.44□□□□□ -1.86
NKX2-1P43699 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-1P43699 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
NKX2-1P43699 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-1P43699 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX2-1P43699 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.44□□□□□ -1.86
NKX2-1P43699 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-1P43699 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX2-1P43699 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX2-1P43699 AC008033.1-201ENST00000216407 1162 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-1P43699 RNU6-1249P-201ENST00000363237 111 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 RNA5SP322-201ENST00000363617 119 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 RNU6-263P-201ENST00000363811 107 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-1P43699 RNA5SP87-201ENST00000384155 118 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 MIR659-201ENST00000384963 97 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 RNU6-952P-201ENST00000391164 108 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 RN7SKP182-201ENST00000410772 298 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 RNU4-78P-201ENST00000410940 126 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-1P43699 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NKX2-1P43699 RPS7P15-201ENST00000415804 584 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.44□□□□□ -1.86
NKX2-1P43699 RPL7P30-201ENST00000420888 709 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.44□□□□□ -1.86
NKX2-1P43699 AC007742.1-201ENST00000425789 329 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX2-1P43699 ELOCP26-201ENST00000436067 329 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 AF228730.2-201ENST00000438784 848 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 RPL12P3-201ENST00000440080 396 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 SDCBPP1-201ENST00000440192 890 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.44□□□□□ -1.86
NKX2-1P43699 AC005297.2-201ENST00000450430 606 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.44□□□□□ -1.86
NKX2-1P43699 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NKX2-1P43699 ST13P14-201ENST00000474095 734 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 RPL31P13-201ENST00000484151 370 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 RPL32P9-201ENST00000487963 407 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.44□□□□□ -1.86
NKX2-1P43699 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 NDUFA5P12-201ENST00000503796 343 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.44□□□□□ -1.86
NKX2-1P43699 AC006390.1-201ENST00000508068 283 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 AC024589.1-201ENST00000512207 263 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.44□□□□□ -1.86
NKX2-1P43699 FTH1P9-201ENST00000513251 355 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 MTCO3P28-201ENST00000513351 515 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 AC108064.1-201ENST00000513791 460 ntBASIC3.44□□□□□ -1.86
NKX2-1P43699 AC093677.1-201ENST00000514414 678 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms