Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.3□□□□□ -1.88
FDFT1P37268 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.3□□□□□ -1.88
FDFT1P37268 OR5H5P-201ENST00000503164 928 ntBASIC3.3□□□□□ -1.88
FDFT1P37268 AP001207.2-201ENST00000519490 539 ntBASIC3.3□□□□□ -1.88
FDFT1P37268 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FDFT1P37268 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.3□□□□□ -1.88
FDFT1P37268 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.3□□□□□ -1.88
FDFT1P37268 HIGD1AP1-201ENST00000550979 275 ntBASIC3.3□□□□□ -1.88
FDFT1P37268 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.3□□□□□ -1.88
FDFT1P37268 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.3□□□□□ -1.88
FDFT1P37268 AL355812.1-201ENST00000603215 216 ntBASIC3.3□□□□□ -1.88
FDFT1P37268 AL162713.1-201ENST00000604480 262 ntBASIC3.3□□□□□ -1.88
FDFT1P37268 AL512506.1-201ENST00000613918 449 ntBASIC3.3□□□□□ -1.88
FDFT1P37268 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.3□□□□□ -1.88
FDFT1P37268 AC106730.3-201ENST00000624568 641 ntBASIC3.3□□□□□ -1.88
FDFT1P37268 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.3□□□□□ -1.88
FDFT1P37268 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.3□□□□□ -1.88
FDFT1P37268 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
FDFT1P37268 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
FDFT1P37268 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
FDFT1P37268 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 MTND5P31-201ENST00000419366 1374 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 AL512283.1-201ENST00000606756 1384 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
FDFT1P37268 RNU6-609P-201ENST00000365459 107 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.29□□□□□ -1.88
FDFT1P37268 Y_RNA.493-201ENST00000384422 102 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 RNU6-441P-201ENST00000384545 106 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
FDFT1P37268 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.29□□□□□ -1.88
FDFT1P37268 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.29□□□□□ -1.88
FDFT1P37268 AC005019.1-201ENST00000436455 431 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.29□□□□□ -1.88
FDFT1P37268 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.29□□□□□ -1.88
FDFT1P37268 AC010285.1-201ENST00000470580 392 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.29□□□□□ -1.88
FDFT1P37268 RPS27AP1-201ENST00000475545 471 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 RPS4XP6-201ENST00000477670 797 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 RN7SL283P-201ENST00000489055 303 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.29□□□□□ -1.88
FDFT1P37268 HMGB1P1-201ENST00000522557 636 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 IGJP1-201ENST00000522682 475 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
FDFT1P37268 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.29□□□□□ -1.88
FDFT1P37268 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
FDFT1P37268 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.29□□□□□ -1.88
FDFT1P37268 AC011611.5-201ENST00000552477 578 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.29□□□□□ -1.88
FDFT1P37268 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.29□□□□□ -1.88
FDFT1P37268 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.29□□□□□ -1.88
FDFT1P37268 MIR4474-201ENST00000579189 78 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 RN7SL622P-201ENST00000585292 275 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.29□□□□□ -1.88
FDFT1P37268 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.29□□□□□ -1.88
FDFT1P37268 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.29□□□□□ -1.88
FDFT1P37268 DPRXP5-201ENST00000604662 539 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 AC026741.1-201ENST00000605892 482 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 SNORA51-201ENST00000606420 132 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 AL513477.2-201ENST00000607858 568 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 AC013468.1-201ENST00000608680 598 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
FDFT1P37268 AC097372.4-201ENST00000625025 466 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.29□□□□□ -1.88
FDFT1P37268 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.29□□□□□ -1.88
FDFT1P37268 AC073055.1-201ENST00000456901 1621 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
FDFT1P37268 AC005183.1-201ENST00000603687 1979 ntBASIC3.29□□□□□ -1.88
FDFT1P37268 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.28□□□□□ -1.88
FDFT1P37268 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.28□□□□□ -1.88
FDFT1P37268 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
FDFT1P37268 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
FDFT1P37268 AP002784.2-201ENST00000397300 549 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.28□□□□□ -1.88
FDFT1P37268 USP9YP19-201ENST00000412165 485 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 AC007899.1-201ENST00000412776 775 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 BX323014.1-201ENST00000412876 237 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 AC245052.5-201ENST00000416320 649 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 AC246680.2-201ENST00000422106 389 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.28□□□□□ -1.88
FDFT1P37268 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.28□□□□□ -1.88
FDFT1P37268 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.28□□□□□ -1.88
FDFT1P37268 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.28□□□□□ -1.88
FDFT1P37268 AC006548.1-201ENST00000427470 102 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 HMGN2P20-201ENST00000437531 273 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 HSFY3P-201ENST00000444242 1191 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 PDSS1P2-201ENST00000449397 678 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 SLC31A1P1-201ENST00000451221 567 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.28□□□□□ -1.88
FDFT1P37268 AC006499.5-201ENST00000505037 514 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.28□□□□□ -1.88
FDFT1P37268 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
FDFT1P37268 AC021678.1-201ENST00000505195 936 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.28□□□□□ -1.88
FDFT1P37268 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.28□□□□□ -1.88
FDFT1P37268 SNORA31.20-201ENST00000517111 133 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 AC124293.1-201ENST00000530034 493 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.28□□□□□ -1.88
FDFT1P37268 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.28□□□□□ -1.88
FDFT1P37268 AC007458.1-201ENST00000542812 373 ntBASIC3.28□□□□□ -1.88
FDFT1P37268 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms