Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC087477.6-201ENST00000559595 843 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 MRPS21P7-201ENST00000566937 238 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 AC127024.5-201ENST00000580085 462 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.95□□□□□ -1.62
HOXC12P31275 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXC12P31275 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC12P31275 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC12P31275 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC12P31275 AL442067.2-201ENST00000614033 363 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 AC068870.2-201ENST00000620635 389 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC12P31275 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC12P31275 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC12P31275 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC12P31275 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC12P31275 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC12P31275 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC12P31275 AC000123.3-201ENST00000624029 4975 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HOXC12P31275 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HOXC12P31275 NXPH1-205ENST00000602349 1953 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
HOXC12P31275 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HOXC12P31275 AC022893.2-201ENST00000564832 3296 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC12P31275 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXC12P31275 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC12P31275 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXC12P31275 AC074029.4-201ENST00000624796 1859 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXC12P31275 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HOXC12P31275 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC12P31275 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
HOXC12P31275 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC12P31275 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 RNU4-79P-201ENST00000362764 141 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 RNA5SP319-201ENST00000362768 119 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 Y_RNA.460-201ENST00000384255 102 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 Y_RNA.493-201ENST00000384422 102 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXC12P31275 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXC12P31275 RNU2-39P-201ENST00000410604 198 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 RNU6-516P-201ENST00000411381 104 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 METTL15P3-201ENST00000415522 1221 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 RNF10P1-201ENST00000418589 369 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 AL354766.1-201ENST00000423396 542 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 AL133173.1-201ENST00000423458 397 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 FABP7P1-201ENST00000424004 391 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 MED13P1-201ENST00000428342 171 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXC12P31275 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC12P31275 RPS17P13-201ENST00000448974 407 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 MTND3P16-201ENST00000452205 344 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC12P31275 RPS29P15-201ENST00000458329 171 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 AC100832.1-201ENST00000471945 383 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC12P31275 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC12P31275 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXC12P31275 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC12P31275 AC004062.1-201ENST00000509926 645 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 HIGD1AP3-201ENST00000515857 278 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 AC105029.1-201ENST00000520250 669 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXC12P31275 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXC12P31275 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXC12P31275 AC093027.1-201ENST00000546698 429 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 AC011611.1-201ENST00000552179 197 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
HOXC12P31275 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 MIR8080-201ENST00000622224 89 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 FRG1KP-201ENST00000623592 341 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXC12P31275 OR55B1P-203ENST00000641518 2602 ntBASIC4.94□□□□□ -1.62
HOXC12P31275 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC12P31275 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXC12P31275 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC12P31275 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC12P31275 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXC12P31275 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXC12P31275 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC12P31275 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC12P31275 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXC12P31275 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HOXC12P31275 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXC12P31275 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXC12P31275 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
HOXC12P31275 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC12P31275 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HOXC12P31275 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXC12P31275 MTND4P35-201ENST00000604257 1375 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXC12P31275 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC12P31275 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC12P31275 Z73965.1-201ENST00000623412 2297 ntBASIC4.93□□□□□ -1.62
HOXC12P31275 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC12P31275 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC12P31275 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXC12P31275 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms