Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RPS15AP40-201ENST00000419621 391 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXA11P31270 GTF2IP23-201ENST00000423746 351 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 AC018644.1-201ENST00000429934 551 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXA11P31270 AC092641.1-201ENST00000440229 772 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXA11P31270 AC073587.1-201ENST00000447093 876 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXA11P31270 RAB9AP1-201ENST00000449393 573 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 FGF7P3-201ENST00000454645 303 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 BX248409.1-201ENST00000455497 255 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 PNPLA4P1-201ENST00000458328 305 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 AL024509.2-201ENST00000493462 493 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 DSTNP2-201ENST00000504533 515 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXA11P31270 AC025554.1-201ENST00000505641 188 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 RNU6-678P-201ENST00000516832 109 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 AC087808.1-201ENST00000520501 361 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 AC106038.2-201ENST00000520706 568 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.27□□□□□ -1.73
HOXA11P31270 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA11P31270 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXA11P31270 AC074050.1-201ENST00000563247 211 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.27□□□□□ -1.73
HOXA11P31270 AC112230.1-201ENST00000604342 547 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA11P31270 AC113194.1-201ENST00000606037 500 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA11P31270 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA11P31270 CR392039.5-201ENST00000623201 510 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 AL773545.4-201ENST00000637262 310 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXA11P31270 FAM157B-203ENST00000639350 358 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 AL513478.4-201ENST00000641636 310 ntBASIC4.27□□□□□ -1.73
HOXA11P31270 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HOXA11P31270 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA11P31270 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA11P31270 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA11P31270 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA11P31270 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HOXA11P31270 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HOXA11P31270 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA11P31270 AL672167.1-206ENST00000356293 943 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 Y_RNA.560-201ENST00000384689 102 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 MIR3074-201ENST00000384885 81 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 MIR525-201ENST00000384978 85 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 MT-TH-201ENST00000387441 69 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 SNORA26.8-201ENST00000391306 124 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 PTMAP2-201ENST00000397627 327 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 RNU6-920P-201ENST00000410926 92 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA11P31270 UBE2V1P10-201ENST00000414685 269 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 MRPS36P1-201ENST00000421291 307 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA11P31270 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA11P31270 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA11P31270 OR4F13P-201ENST00000428478 931 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 PSMA2P3-201ENST00000429685 675 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA11P31270 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 BMS1P19-201ENST00000433925 393 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA11P31270 Z74696.2-201ENST00000436514 498 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 USP9YP7-201ENST00000436723 430 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA11P31270 AL133547.1-201ENST00000448546 220 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 USP9YP32-201ENST00000452432 430 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.26□□□□□ -1.73
HOXA11P31270 CBX3P3-201ENST00000508108 532 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 AC022447.1-201ENST00000515358 464 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 Y_RNA.695-201ENST00000516715 107 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 AC134698.4-201ENST00000523451 826 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA11P31270 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA11P31270 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA11P31270 AC007954.1-201ENST00000554198 494 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 SERPINE4P-201ENST00000554978 281 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 AC087499.8-201ENST00000578406 226 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 VN1R79P-201ENST00000593540 513 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 AC103881.1-201ENST00000603476 538 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 AC112220.3-201ENST00000605502 502 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 AC239868.4-201ENST00000608318 671 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 AC022306.2-201ENST00000617563 647 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 AC006065.5-201ENST00000623427 349 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA11P31270 AC055839.1-201ENST00000634467 498 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 PCMTD1P7-201ENST00000634506 357 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 AC006927.3-201ENST00000638789 384 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA11P31270 AC046144.1-201ENST00000478559 1853 ntBASIC4.26□□□□□ -1.73
HOXA11P31270 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA11P31270 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.25□□□□□ -1.73
HOXA11P31270 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXA11P31270 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA11P31270 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA11P31270 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA11P31270 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HOXA11P31270 HMGB1P5-201ENST00000255320 642 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms