Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DMBP28068 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC073055.1-201ENST00000456901 1621 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DMBP28068 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DMBP28068 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DMBP28068 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DMBP28068 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DMBP28068 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 AC108206.1-201ENST00000570186 4159 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 RNU6-1243P-201ENST00000364028 107 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 RNU6-629P-201ENST00000384061 103 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 MIR1303-201ENST00000408625 86 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 AL353678.1-201ENST00000422735 741 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 RPL21P66-201ENST00000426566 466 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 CYCSP32-201ENST00000440548 321 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 RPS24P6-201ENST00000452670 400 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 ARL4AP2-201ENST00000507378 601 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 AC109635.4-202ENST00000531666 412 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 AL109653.1-201ENST00000603091 248 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 SUMO2P14-201ENST00000604488 293 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 AC073111.2-201ENST00000605657 1075 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DMBP28068 AC105227.2-201ENST00000615075 605 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 AC090617.7-201ENST00000623952 126 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 AC084035.1-201ENST00000634543 607 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 AL359893.1-201ENST00000447628 1580 ntBASIC2.36□□□□□ -2.03
HLA-DMBP28068 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DMBP28068 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DMBP28068 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DMBP28068 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 AL512646.1-201ENST00000269395 1077 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 OR1S2-201ENST00000302592 978 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 SNORD67-201ENST00000390833 111 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 Z86062.1-201ENST00000406773 777 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 DHFRP5-201ENST00000406944 564 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 AL024507.1-201ENST00000412741 274 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 AL139281.1-201ENST00000422120 335 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 FO393419.3-201ENST00000428741 282 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 AL512649.1-201ENST00000428997 581 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 MRPS33P4-201ENST00000434892 317 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DMBP28068 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 COX6CP2-201ENST00000444980 225 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 RPL36AP33-201ENST00000450395 310 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 NPM1P13-201ENST00000452663 865 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 NECAP1P2-201ENST00000455668 727 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 snoU13.3-201ENST00000459441 104 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 SYPL1P1-201ENST00000473622 768 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 RN7SL20P-201ENST00000488827 297 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 AL024509.2-201ENST00000493462 493 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 RN7SL504P-201ENST00000494496 287 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DMBP28068 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 AP004371.1-201ENST00000525240 214 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 AC015849.2-201ENST00000605738 409 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 AL590282.1-201ENST00000610379 1136 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 AL390240.1-201ENST00000612950 384 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 U73479.1-201ENST00000618062 168 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DMBP28068 MTND5P28-201ENST00000438005 1594 ntBASIC2.35□□□□□ -2.03
HLA-DMBP28068 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DMBP28068 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.34□□□□□ -2.03
HLA-DMBP28068 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DMBP28068 MAPK10-322ENST00000641485 4530 ntBASIC2.34□□□□□ -2.03
HLA-DMBP28068 AC004925.1-201ENST00000624256 2706 ntBASIC2.34□□□□□ -2.03
HLA-DMBP28068 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms