Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH3P22223 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH3P22223 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH3P22223 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH3P22223 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH3P22223 MIR4504-201ENST00000577413 92 ntBASIC3.8□□□□□ -1.8
CDH3P22223 MIR1254-2-201ENST00000579553 63 ntBASIC3.8□□□□□ -1.8
CDH3P22223 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH3P22223 MRPS35P3-201ENST00000603189 709 ntBASIC3.8□□□□□ -1.8
CDH3P22223 DUXAP3-201ENST00000603616 594 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AL451086.1-201ENST00000605596 223 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AC091946.2-201ENST00000606105 291 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AC009464.1-201ENST00000615731 469 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AL354798.1-201ENST00000622505 329 ntBASIC3.8□□□□□ -1.8
CDH3P22223 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH3P22223 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CDH3P22223 MTND5P28-201ENST00000438005 1594 ntBASIC3.8□□□□□ -1.8
CDH3P22223 SNORD113-6-201ENST00000363345 75 ntBASIC3.79□□□□□ -1.8
CDH3P22223 RNU6-1243P-201ENST00000364028 107 ntBASIC3.79□□□□□ -1.8
CDH3P22223 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH3P22223 RNU6-213P-201ENST00000384051 104 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AL355379.1-201ENST00000405542 640 ntBASIC3.79□□□□□ -1.8
CDH3P22223 CYCSP19-201ENST00000411715 316 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AC010099.3-201ENST00000423896 409 ntBASIC3.79□□□□□ -1.8
CDH3P22223 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH3P22223 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH3P22223 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH3P22223 AL590399.6-201ENST00000446396 307 ntBASIC3.79□□□□□ -1.8
CDH3P22223 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH3P22223 MTCO2P25-201ENST00000447065 681 ntBASIC3.79□□□□□ -1.8
CDH3P22223 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH3P22223 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH3P22223 MTCO3P20-201ENST00000454926 688 ntBASIC3.79□□□□□ -1.8
CDH3P22223 VN1R40P-201ENST00000455196 941 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH3P22223 AC004801.2-202ENST00000463559 283 ntBASIC3.79□□□□□ -1.8
CDH3P22223 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH3P22223 AC068587.2-201ENST00000478386 781 ntBASIC3.79□□□□□ -1.8
CDH3P22223 RN7SL323P-201ENST00000494712 295 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH3P22223 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH3P22223 RNU5A-4P-201ENST00000516588 111 ntBASIC3.79□□□□□ -1.8
CDH3P22223 RNU1-45P-201ENST00000517191 141 ntBASIC3.79□□□□□ -1.8
CDH3P22223 RNU6-1261P-201ENST00000517194 104 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AC027309.2-201ENST00000520566 192 ntBASIC3.79□□□□□ -1.8
CDH3P22223 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH3P22223 ARL2BPP5-201ENST00000523141 481 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH3P22223 MTCO1P49-201ENST00000523429 802 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH3P22223 AC010198.2-201ENST00000550612 259 ntBASIC3.79□□□□□ -1.8
CDH3P22223 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH3P22223 AC007599.1-201ENST00000568688 1174 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AC107982.3-201ENST00000584957 985 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AC092954.1-201ENST00000609121 445 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CDH3P22223 AC034229.5-201ENST00000624258 185 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AC092184.1-201ENST00000625042 715 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AC068620.4-201ENST00000636730 1182 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AL773545.4-201ENST00000637262 310 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AL513478.4-201ENST00000641636 310 ntBASIC3.79□□□□□ -1.8
CDH3P22223 SAGE4P-201ENST00000442271 3381 ntBASIC3.79□□□□□ -1.8
CDH3P22223 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH3P22223 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH3P22223 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH3P22223 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH3P22223 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.78□□□□□ -1.8
CDH3P22223 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH3P22223 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH3P22223 FAM133CP-201ENST00000332869 704 ntBASIC3.78□□□□□ -1.8
CDH3P22223 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH3P22223 SNORA51.2-201ENST00000364595 132 ntBASIC3.78□□□□□ -1.8
CDH3P22223 RNU6-657P-201ENST00000383904 107 ntBASIC3.78□□□□□ -1.8
CDH3P22223 RPL32P23-201ENST00000397237 405 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AC119751.3-201ENST00000399720 670 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AP000567.1-201ENST00000406413 156 ntBASIC3.78□□□□□ -1.8
CDH3P22223 MTHFD2P2-201ENST00000407725 247 ntBASIC3.78□□□□□ -1.8
CDH3P22223 RN7SKP159-201ENST00000410657 292 ntBASIC3.78□□□□□ -1.8
CDH3P22223 RN7SKP27-201ENST00000410684 333 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AC068533.2-201ENST00000411872 306 ntBASIC3.78□□□□□ -1.8
CDH3P22223 VPS26BP1-201ENST00000417155 755 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH3P22223 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH3P22223 ARF4P2-201ENST00000430209 526 ntBASIC3.78□□□□□ -1.8
CDH3P22223 ATP5F1P1-201ENST00000433775 569 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH3P22223 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH3P22223 MTND1P26-201ENST00000440488 538 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH3P22223 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH3P22223 RANP8-201ENST00000444720 713 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH3P22223 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH3P22223 RPL23AP14-201ENST00000468281 468 ntBASIC3.78□□□□□ -1.8
CDH3P22223 NCOR1P1-202ENST00000486162 291 ntBASIC3.78□□□□□ -1.8
CDH3P22223 ACTG1P13-201ENST00000486987 1043 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AC005726.1-201ENST00000494679 427 ntBASIC3.78□□□□□ -1.8
CDH3P22223 RPL31P61-201ENST00000496160 376 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AC079395.1-201ENST00000510981 262 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AC116353.3-201ENST00000511215 249 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms