| TFE3 | P19532 | RN7SL222P-201 | ENST00000476452 | 299 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | OR2AO1P-201 | ENST00000476497 | 403 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | BX284632.1-201 | ENST00000478218 | 541 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC068305.1-201 | ENST00000497406 | 726 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC020893.1-201 | ENST00000502452 | 580 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | LINC02491-201 | ENST00000504710 | 403 nt | TSL 2 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC107396.1-201 | ENST00000509641 | 735 nt | TSL 5 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC016559.2-201 | ENST00000510759 | 359 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC112206.3-201 | ENST00000514578 | 389 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | SLIT2-IT1-201 | ENST00000515882 | 601 nt | TSL 1 (best) BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | Y_RNA.691-201 | ENST00000516611 | 103 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | RN7SKP82-201 | ENST00000516786 | 223 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AP003072.1-201 | ENST00000531740 | 145 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AP000857.1-201 | ENST00000532151 | 543 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC092490.2-202 | ENST00000544922 | 462 nt | TSL 3 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC078778.1-201 | ENST00000547177 | 735 nt | TSL 3 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AL132780.1-201 | ENST00000548819 | 556 nt | TSL 4 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC025263.2-201 | ENST00000550437 | 548 nt | APPRIS P1 TSL 5 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC012181.3-201 | ENST00000565861 | 601 nt | TSL 4 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | LINC02185-201 | ENST00000575424 | 760 nt | TSL 5 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | PPIAL4F-202 | ENST00000581138 | 660 nt | APPRIS P1 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | PPIAL4E-201 | ENST00000581164 | 785 nt | APPRIS P1 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | DAB1-AS1-208 | ENST00000586465 | 748 nt | TSL 5 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC009597.2-201 | ENST00000604659 | 592 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AL121992.2-201 | ENST00000606262 | 256 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | RNU6-89P-201 | ENST00000606519 | 100 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AL022345.1-201 | ENST00000607292 | 135 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC083798.2-205 | ENST00000608015 | 575 nt | TSL 5 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC022017.1-201 | ENST00000608793 | 559 nt | TSL 4 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC104237.2-201 | ENST00000612456 | 443 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | MIR6826-201 | ENST00000617808 | 98 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC068831.8-201 | ENST00000620171 | 435 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AP000843.1-201 | ENST00000624880 | 701 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC006355.2-201 | ENST00000629240 | 317 nt | TSL 3 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | BX088723.1-201 | ENST00000637785 | 708 nt | TSL 5 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC074101.1-201 | ENST00000637861 | 241 nt | BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | ATM-228 | ENST00000639240 | 498 nt | TSL 5 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | ATM-230 | ENST00000640388 | 578 nt | TSL 5 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | PLEKHG7-201 | ENST00000344636 | 3868 nt | TSL 5 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | ZNF525-202 | ENST00000474037 | 3890 nt | APPRIS P1 TSL 5 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | C9orf153-204 | ENST00000613665 | 1738 nt | APPRIS P2 TSL 2 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | STON1-201 | ENST00000404752 | 5511 nt | APPRIS P1 TSL 1 (best) BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | OR4E2-202 | ENST00000641524 | 2855 nt | APPRIS P1 BASIC | 5.45 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC023421.1-201 | ENST00000590535 | 1785 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | C6orf10-205 | ENST00000527965 | 2076 nt | APPRIS ALT2 TSL 2 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | SDCBP-213 | ENST00000630925 | 2076 nt | TSL 5 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | RCOR3-201 | ENST00000367005 | 4246 nt | TSL 1 (best) BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | LMO3-209 | ENST00000447609 | 3365 nt | APPRIS P1 TSL 1 (best) BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | SPATA17-201 | ENST00000366933 | 5818 nt | APPRIS P1 TSL 1 (best) BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | SYNJ2BP-201 | ENST00000256366 | 7015 nt | APPRIS P1 TSL 1 (best) BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | ZNF734P-201 | ENST00000419494 | 1534 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | ITGAV-204 | ENST00000433736 | 3288 nt | APPRIS ALT2 TSL 2 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC011604.2-201 | ENST00000381541 | 2268 nt | APPRIS ALT2 TSL 2 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | STARD9-201 | ENST00000290607 | 15567 nt | APPRIS P1 TSL 5 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | HMGB1-201 | ENST00000326004 | 821 nt | TSL 3 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | MTUS1-203 | ENST00000381861 | 3996 nt | APPRIS P4 TSL 2 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | Y_RNA.419-201 | ENST00000384041 | 102 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | RNU6-146P-201 | ENST00000384602 | 108 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | MIR514A2-201 | ENST00000385131 | 88 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | MIR514A3-201 | ENST00000385132 | 88 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | TRAV12-2-201 | ENST00000390437 | 445 nt | APPRIS P1 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | U3.29-201 | ENST00000391296 | 212 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | ENSAP1-201 | ENST00000392855 | 326 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | KTN1-202 | ENST00000395308 | 4134 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | Z86062.2-201 | ENST00000411442 | 380 nt | TSL 5 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | RAB28P1-201 | ENST00000411517 | 641 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | OR1AA1P-201 | ENST00000419597 | 916 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC073323.1-201 | ENST00000419832 | 451 nt | TSL 2 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | HNRNPA3P4-201 | ENST00000427514 | 803 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | HMGB1P18-201 | ENST00000438801 | 619 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AL035634.1-201 | ENST00000446768 | 372 nt | TSL 2 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC010127.1-209 | ENST00000447809 | 2305 nt | TSL 1 (best) BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AL445524.1-204 | ENST00000454631 | 458 nt | TSL 3 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | Z92846.1-201 | ENST00000456203 | 268 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | RNU6-329P-201 | ENST00000459618 | 107 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | LINC02513-201 | ENST00000503465 | 500 nt | TSL 2 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC116562.3-201 | ENST00000506136 | 177 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC006427.1-201 | ENST00000514359 | 712 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | RNU4-49P-201 | ENST00000516080 | 140 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | RNA5SP92-201 | ENST00000516437 | 110 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC068672.1-201 | ENST00000520391 | 328 nt | TSL 3 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AP005639.2-201 | ENST00000527592 | 928 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC068587.5-201 | ENST00000528506 | 175 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC026765.1-201 | ENST00000547876 | 435 nt | TSL 3 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC103739.1-201 | ENST00000558389 | 474 nt | TSL 3 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC087500.2-201 | ENST00000575056 | 498 nt | TSL 5 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC129492.2-201 | ENST00000577807 | 517 nt | TSL 3 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | RN7SL708P-201 | ENST00000580952 | 299 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | ZNF780A-205 | ENST00000594395 | 2044 nt | APPRIS ALT2 TSL 2 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC022154.1-203 | ENST00000594850 | 493 nt | TSL 3 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | LINC01515-204 | ENST00000595269 | 402 nt | TSL 5 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AL355812.1-201 | ENST00000603215 | 216 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC020910.2-201 | ENST00000603635 | 610 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | AC126915.2-201 | ENST00000610957 | 190 nt | BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | CU634019.2-201 | ENST00000625184 | 593 nt | TSL 3 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | DAOA-212 | ENST00000640578 | 378 nt | APPRIS ALT2 TSL 5 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | TJP1-202 | ENST00000356107 | 6747 nt | APPRIS ALT2 TSL 5 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | CYP4Z1-201 | ENST00000334194 | 1906 nt | APPRIS P1 TSL 1 (best) BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | NT5C3A-202 | ENST00000381626 | 1909 nt | APPRIS ALT1 TSL 5 BASIC | 5.44 | □□□□□ -1.54 | | |
| TFE3 | P19532 | SENP1-205 | ENST00000549595 | 1932 nt | APPRIS ALT1 TSL 5 BASIC | 5.44 | □□□□□ -1.54 | | |