Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
CD28P10747 AC008121.2-201ENST00000614647 523 ntBASIC2.6□□□□□ -1.99
CD28P10747 XIST_intron.1-201ENST00000619444 68 ntBASIC2.6□□□□□ -1.99
CD28P10747 AC020923.1-201ENST00000624021 917 ntBASIC2.6□□□□□ -1.99
CD28P10747 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.6□□□□□ -1.99
CD28P10747 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CD28P10747 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CD28P10747 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.6□□□□□ -1.99
CD28P10747 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.59□□□□□ -1.99
CD28P10747 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.59□□□□□ -1.99
CD28P10747 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.59□□□□□ -1.99
CD28P10747 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.59□□□□□ -1.99
CD28P10747 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CD28P10747 SNORA7.2-201ENST00000364446 145 ntBASIC2.59□□□□□ -1.99
CD28P10747 RNA5SP189-201ENST00000364920 115 ntBASIC2.59□□□□□ -1.99
CD28P10747 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CD28P10747 MIR525-201ENST00000384978 85 ntBASIC2.59□□□□□ -1.99
CD28P10747 MIR16-1-201ENST00000385271 89 ntBASIC2.59□□□□□ -1.99
CD28P10747 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CD28P10747 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.59□□□□□ -1.99
CD28P10747 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.59□□□□□ -1.99
CD28P10747 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.59□□□□□ -1.99
CD28P10747 AC233981.1-201ENST00000423224 461 ntBASIC2.59□□□□□ -1.99
CD28P10747 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.59□□□□□ -1.99
CD28P10747 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.59□□□□□ -1.99
CD28P10747 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.59□□□□□ -1.99
CD28P10747 B3GNT2P1-201ENST00000434960 952 ntBASIC2.59□□□□□ -1.99
CD28P10747 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.59□□□□□ -1.99
CD28P10747 TXNP1-201ENST00000441872 371 ntBASIC2.59□□□□□ -1.99
CD28P10747 AL357552.1-201ENST00000445254 415 ntBASIC2.59□□□□□ -1.99
CD28P10747 MOB1AP2-201ENST00000446060 614 ntBASIC2.59□□□□□ -1.99
CD28P10747 AL096829.2-201ENST00000446582 742 ntBASIC2.59□□□□□ -1.99
CD28P10747 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.59□□□□□ -1.99
CD28P10747 ACTG1P13-201ENST00000486987 1043 ntBASIC2.59□□□□□ -1.99
CD28P10747 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.59□□□□□ -1.99
CD28P10747 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.59□□□□□ -1.99
CD28P10747 AC112518.2-201ENST00000508565 425 ntBASIC2.59□□□□□ -1.99
CD28P10747 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CD28P10747 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.59□□□□□ -1.99
CD28P10747 SNORA70.19-201ENST00000516717 90 ntBASIC2.59□□□□□ -1.99
CD28P10747 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.59□□□□□ -1.99
CD28P10747 AP000889.1-201ENST00000530968 660 ntBASIC2.59□□□□□ -1.99
CD28P10747 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.59□□□□□ -1.99
CD28P10747 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.59□□□□□ -1.99
CD28P10747 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.59□□□□□ -1.99
CD28P10747 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.59□□□□□ -1.99
CD28P10747 BPTFP1-201ENST00000579209 492 ntBASIC2.59□□□□□ -1.99
CD28P10747 AC022069.1-201ENST00000582910 658 ntBASIC2.59□□□□□ -1.99
CD28P10747 OR4G1P-201ENST00000588632 938 ntBASIC2.59□□□□□ -1.99
CD28P10747 AL020997.3-201ENST00000602843 359 ntBASIC2.59□□□□□ -1.99
CD28P10747 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.59□□□□□ -1.99
CD28P10747 AC112503.2-201ENST00000609005 552 ntBASIC2.59□□□□□ -1.99
CD28P10747 RMST_8.1-201ENST00000610287 165 ntBASIC2.59□□□□□ -1.99
CD28P10747 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CD28P10747 AC026422.1-201ENST00000623961 452 ntBASIC2.59□□□□□ -1.99
CD28P10747 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CD28P10747 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CD28P10747 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.59□□□□□ -2
CD28P10747 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.59□□□□□ -2
CD28P10747 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CD28P10747 SGO1P1-201ENST00000603525 1447 ntBASIC2.59□□□□□ -2
CD28P10747 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CD28P10747 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CD28P10747 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
CD28P10747 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
CD28P10747 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.58□□□□□ -2
CD28P10747 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.58□□□□□ -2
CD28P10747 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.58□□□□□ -2
CD28P10747 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CD28P10747 RNU6-335P-201ENST00000364563 113 ntBASIC2.58□□□□□ -2
CD28P10747 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.58□□□□□ -2
CD28P10747 RNU6-1226P-201ENST00000384317 107 ntBASIC2.58□□□□□ -2
CD28P10747 MIR607-201ENST00000385241 96 ntBASIC2.58□□□□□ -2
CD28P10747 RPL22P22-201ENST00000395439 379 ntBASIC2.58□□□□□ -2
CD28P10747 MIR1250-201ENST00000408098 113 ntBASIC2.58□□□□□ -2
CD28P10747 AC073264.1-201ENST00000411508 416 ntBASIC2.58□□□□□ -2
CD28P10747 LIPT1P1-201ENST00000415870 1186 ntBASIC2.58□□□□□ -2
CD28P10747 AL512637.2-201ENST00000431287 1256 ntBASIC2.58□□□□□ -2
CD28P10747 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.58□□□□□ -2
CD28P10747 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.58□□□□□ -2
CD28P10747 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.58□□□□□ -2
CD28P10747 AP001992.1-205ENST00000462248 379 ntBASIC2.58□□□□□ -2
CD28P10747 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
CD28P10747 RPS4XP22-201ENST00000480755 780 ntBASIC2.58□□□□□ -2
CD28P10747 MTCO2P9-201ENST00000503214 694 ntBASIC2.58□□□□□ -2
CD28P10747 PCBP2P3-201ENST00000509726 843 ntBASIC2.58□□□□□ -2
CD28P10747 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.58□□□□□ -2
CD28P10747 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.58□□□□□ -2
CD28P10747 AP006245.1-201ENST00000522549 120 ntBASIC2.58□□□□□ -2
CD28P10747 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.58□□□□□ -2
CD28P10747 OR5D17P-201ENST00000531492 978 ntBASIC2.58□□□□□ -2
CD28P10747 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.58□□□□□ -2
CD28P10747 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.58□□□□□ -2
CD28P10747 HIGD1AP1-201ENST00000550979 275 ntBASIC2.58□□□□□ -2
CD28P10747 AC011611.5-201ENST00000552477 578 ntBASIC2.58□□□□□ -2
CD28P10747 AC005476.1-201ENST00000554427 397 ntBASIC2.58□□□□□ -2
CD28P10747 MIR3186-201ENST00000577404 85 ntBASIC2.58□□□□□ -2
CD28P10747 MIR5004-201ENST00000579078 107 ntBASIC2.58□□□□□ -2
CD28P10747 AC015917.1-201ENST00000579654 510 ntBASIC2.58□□□□□ -2
CD28P10747 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms