Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC007389.2-201ENST00000434630 306 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL1P09341 CR769767.1-201ENST00000436337 346 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 XKRYP6-201ENST00000440468 1116 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 XKRYP3-201ENST00000442113 1116 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 AC016696.1-201ENST00000446949 318 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 AL359893.1-201ENST00000447628 1580 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 RPL26P28-201ENST00000451325 435 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 NUTF2P7-201ENST00000453086 375 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 AC104472.2-201ENST00000469035 601 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 AC010285.1-201ENST00000470580 392 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 AC017015.1-201ENST00000477387 286 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CXCL1P09341 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.21□□□□□ -2.06
CXCL1P09341 RNA5SP402-201ENST00000517148 110 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 AC019227.1-201ENST00000526902 510 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.21□□□□□ -2.06
CXCL1P09341 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.21□□□□□ -2.06
CXCL1P09341 AC090751.1-201ENST00000566966 267 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 MIR3160-1-201ENST00000577972 85 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 MIR4446-201ENST00000578505 67 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 MIR4443-201ENST00000585052 53 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 MIR3922-201ENST00000585192 84 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 AC005242.1-201ENST00000585658 438 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 RPL12P50-201ENST00000603116 116 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 AC007566.2-201ENST00000603642 413 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 PRELID3BP8-201ENST00000604148 295 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.21□□□□□ -2.06
CXCL1P09341 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CXCL1P09341 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.21□□□□□ -2.06
CXCL1P09341 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.21□□□□□ -2.06
CXCL1P09341 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.21□□□□□ -2.06
CXCL1P09341 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CXCL1P09341 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CXCL1P09341 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CXCL1P09341 AL122126.1-201ENST00000546905 1318 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CXCL1P09341 SNORD67-201ENST00000390833 111 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CXCL1P09341 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CXCL1P09341 MTATP6P31-201ENST00000406985 692 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AL353692.2-201ENST00000407054 335 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 MIR1289-1-201ENST00000408836 144 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.2□□□□□ -2.06
CXCL1P09341 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.2□□□□□ -2.06
CXCL1P09341 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.2□□□□□ -2.06
CXCL1P09341 AL133547.1-201ENST00000448546 220 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AP002345.1-201ENST00000456493 928 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.2□□□□□ -2.06
CXCL1P09341 GAPDHP39-201ENST00000481866 979 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AP002812.1-201ENST00000495378 474 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 PRELID3BP6-201ENST00000503839 571 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AC111193.1-201ENST00000504097 155 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC2.2□□□□□ -2.06
CXCL1P09341 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.2□□□□□ -2.06
CXCL1P09341 AC008565.1-201ENST00000509046 885 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AC105914.1-201ENST00000511798 226 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.2□□□□□ -2.06
CXCL1P09341 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.2□□□□□ -2.06
CXCL1P09341 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.2□□□□□ -2.06
CXCL1P09341 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.2□□□□□ -2.06
CXCL1P09341 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
CXCL1P09341 AADACP1-206ENST00000561502 1193 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.2□□□□□ -2.06
CXCL1P09341 AC138761.3-201ENST00000579993 334 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AP001029.3-201ENST00000588063 596 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 VN1R85P-201ENST00000601587 426 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AC103881.1-201ENST00000603476 538 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 DUXAP3-201ENST00000603616 594 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AL049779.4-201ENST00000604500 156 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 BX664608.1-201ENST00000610519 487 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.2□□□□□ -2.06
CXCL1P09341 AC006111.3-201ENST00000622137 383 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 CR381653.2-201ENST00000624041 768 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.2□□□□□ -2.06
CXCL1P09341 AC016717.3-201ENST00000624730 554 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AL034408.1-202ENST00000636088 415 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CXCL1P09341 AC091564.4-201ENST00000533934 2194 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
CXCL1P09341 AL512283.1-201ENST00000606756 1384 ntBASIC2.2□□□□□ -2.06
CXCL1P09341 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CXCL1P09341 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CXCL1P09341 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CXCL1P09341 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CXCL1P09341 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.19□□□□□ -2.06
CXCL1P09341 AP002907.1-201ENST00000606361 1430 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CXCL1P09341 RNU6-386P-201ENST00000362650 107 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.19□□□□□ -2.06
CXCL1P09341 MIR512-1-201ENST00000384913 84 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 MIR141-201ENST00000384975 95 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 RNU6-837P-201ENST00000391056 108 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CXCL1P09341 RAB9AP3-201ENST00000412737 573 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 BX323014.1-201ENST00000412876 237 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.19□□□□□ -2.06
CXCL1P09341 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.19□□□□□ -2.06
CXCL1P09341 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms