Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC116618.1-201ENST00000634617 774 ntBASIC4.14□□□□□ -1.75
RB1P06400 MIR4278-201ENST00000636094 69 ntBASIC4.14□□□□□ -1.75
RB1P06400 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RB1P06400 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
RB1P06400 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RB1P06400 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RB1P06400 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
RB1P06400 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.13□□□□□ -1.75
RB1P06400 MARK2P15-201ENST00000432204 2186 ntBASIC4.13□□□□□ -1.75
RB1P06400 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RB1P06400 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.13□□□□□ -1.75
RB1P06400 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RB1P06400 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RB1P06400 SNRPEP3-201ENST00000338402 276 ntBASIC4.13□□□□□ -1.75
RB1P06400 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.13□□□□□ -1.75
RB1P06400 RNA5SP167-201ENST00000365461 116 ntBASIC4.13□□□□□ -1.75
RB1P06400 RNU6-730P-201ENST00000383954 104 ntBASIC4.13□□□□□ -1.75
RB1P06400 RNU6-83P-201ENST00000384568 112 ntBASIC4.13□□□□□ -1.75
RB1P06400 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RB1P06400 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.13□□□□□ -1.75
RB1P06400 MTCYBP24-201ENST00000420387 1106 ntBASIC4.13□□□□□ -1.75
RB1P06400 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
RB1P06400 AL139421.1-201ENST00000423010 169 ntBASIC4.13□□□□□ -1.75
RB1P06400 MTCO2P20-201ENST00000437339 673 ntBASIC4.13□□□□□ -1.75
RB1P06400 AC083863.1-201ENST00000438811 231 ntBASIC4.13□□□□□ -1.75
RB1P06400 CYCSP35-201ENST00000451978 304 ntBASIC4.13□□□□□ -1.75
RB1P06400 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.13□□□□□ -1.75
RB1P06400 RPL32P34-201ENST00000486380 400 ntBASIC4.13□□□□□ -1.75
RB1P06400 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.13□□□□□ -1.75
RB1P06400 MTCO3P44-201ENST00000510977 541 ntBASIC4.13□□□□□ -1.75
RB1P06400 AC007991.1-201ENST00000522680 631 ntBASIC4.13□□□□□ -1.75
RB1P06400 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.13□□□□□ -1.75
RB1P06400 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.13□□□□□ -1.75
RB1P06400 OR6C73P-201ENST00000546432 358 ntBASIC4.13□□□□□ -1.75
RB1P06400 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.13□□□□□ -1.75
RB1P06400 AC037471.2-201ENST00000564941 598 ntBASIC4.13□□□□□ -1.75
RB1P06400 AC079171.1-201ENST00000568788 914 ntBASIC4.13□□□□□ -1.75
RB1P06400 AL031985.2-201ENST00000600955 480 ntBASIC4.13□□□□□ -1.75
RB1P06400 AF131215.7-201ENST00000602443 707 ntBASIC4.13□□□□□ -1.75
RB1P06400 AC104662.1-201ENST00000604448 511 ntBASIC4.13□□□□□ -1.75
RB1P06400 AC025588.2-201ENST00000604851 466 ntBASIC4.13□□□□□ -1.75
RB1P06400 AC092650.2-201ENST00000619984 902 ntBASIC4.13□□□□□ -1.75
RB1P06400 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.13□□□□□ -1.75
RB1P06400 AC018816.2-201ENST00000621460 353 ntBASIC4.13□□□□□ -1.75
RB1P06400 AC073530.2-201ENST00000623987 261 ntBASIC4.13□□□□□ -1.75
RB1P06400 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RB1P06400 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RB1P06400 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RB1P06400 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RB1P06400 ZNF37BP-203ENST00000452306 1352 ntBASIC4.13□□□□□ -1.75
RB1P06400 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RB1P06400 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
RB1P06400 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RB1P06400 Y_RNA.311-201ENST00000365068 96 ntBASIC4.12□□□□□ -1.75
RB1P06400 RNU6-339P-201ENST00000384310 107 ntBASIC4.12□□□□□ -1.75
RB1P06400 RNVU1-14-201ENST00000384770 164 ntBASIC4.12□□□□□ -1.75
RB1P06400 MIR634-201ENST00000385208 97 ntBASIC4.12□□□□□ -1.75
RB1P06400 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RB1P06400 AC016769.3-201ENST00000396562 315 ntBASIC4.12□□□□□ -1.75
RB1P06400 EIF5P1-201ENST00000400019 1231 ntBASIC4.12□□□□□ -1.75
RB1P06400 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.12□□□□□ -1.75
RB1P06400 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.12□□□□□ -1.75
RB1P06400 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.12□□□□□ -1.75
RB1P06400 AC092427.1-201ENST00000439177 601 ntBASIC4.12□□□□□ -1.75
RB1P06400 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.12□□□□□ -1.75
RB1P06400 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.12□□□□□ -1.75
RB1P06400 AL591719.1-201ENST00000444669 744 ntBASIC4.12□□□□□ -1.75
RB1P06400 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.12□□□□□ -1.75
RB1P06400 SNORD105B-201ENST00000458770 79 ntBASIC4.12□□□□□ -1.75
RB1P06400 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.12□□□□□ -1.75
RB1P06400 AC093767.1-201ENST00000504523 156 ntBASIC4.12□□□□□ -1.75
RB1P06400 AC034244.1-201ENST00000507687 207 ntBASIC4.12□□□□□ -1.75
RB1P06400 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.12□□□□□ -1.75
RB1P06400 IGLV3-26-201ENST00000520756 302 ntBASIC4.12□□□□□ -1.75
RB1P06400 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.12□□□□□ -1.75
RB1P06400 AP001636.2-201ENST00000525517 696 ntBASIC4.12□□□□□ -1.75
RB1P06400 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.12□□□□□ -1.75
RB1P06400 OR5B10P-201ENST00000532869 642 ntBASIC4.12□□□□□ -1.75
RB1P06400 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.12□□□□□ -1.75
RB1P06400 MIR3922-201ENST00000585192 84 ntBASIC4.12□□□□□ -1.75
RB1P06400 AL031666.3-201ENST00000609320 1006 ntBASIC4.12□□□□□ -1.75
RB1P06400 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.12□□□□□ -1.75
RB1P06400 U73479.1-201ENST00000618062 168 ntBASIC4.12□□□□□ -1.75
RB1P06400 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.12□□□□□ -1.75
RB1P06400 AC244258.1-201ENST00000637553 1071 ntBASIC4.12□□□□□ -1.75
RB1P06400 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RB1P06400 AP000776.1-201ENST00000530032 1663 ntBASIC4.12□□□□□ -1.75
RB1P06400 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
RB1P06400 PRO1804-201ENST00000623780 2050 ntBASIC4.12□□□□□ -1.75
RB1P06400 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RB1P06400 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RB1P06400 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RB1P06400 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RB1P06400 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RB1P06400 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RB1P06400 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RB1P06400 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RB1P06400 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RB1P06400 FAM133CP-201ENST00000332869 704 ntBASIC4.11□□□□□ -1.75
RB1P06400 RNVU1-3-201ENST00000364313 161 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms