Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHGBP05060 RNY4P34-201ENST00000364779 95 ntBASIC5.23□□□□□ -1.57
CHGBP05060 Y_RNA.402-201ENST00000383972 102 ntBASIC5.23□□□□□ -1.57
CHGBP05060 Y_RNA.409-201ENST00000383990 98 ntBASIC5.23□□□□□ -1.57
CHGBP05060 RNU6-317P-201ENST00000384031 107 ntBASIC5.23□□□□□ -1.57
CHGBP05060 RNU6-533P-201ENST00000384144 107 ntBASIC5.23□□□□□ -1.57
CHGBP05060 RNU6-178P-201ENST00000384631 104 ntBASIC5.23□□□□□ -1.57
CHGBP05060 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHGBP05060 MIR1911-201ENST00000410783 80 ntBASIC5.23□□□□□ -1.57
CHGBP05060 SNORA74C-2-201ENST00000411179 201 ntBASIC5.23□□□□□ -1.57
CHGBP05060 RPS3AP3-201ENST00000411933 242 ntBASIC5.23□□□□□ -1.57
CHGBP05060 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.23□□□□□ -1.57
CHGBP05060 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.23□□□□□ -1.57
CHGBP05060 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CHGBP05060 PPIAP13-201ENST00000434706 478 ntBASIC5.23□□□□□ -1.57
CHGBP05060 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CHGBP05060 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.23□□□□□ -1.57
CHGBP05060 AP000542.1-201ENST00000448473 371 ntBASIC5.23□□□□□ -1.57
CHGBP05060 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.23□□□□□ -1.57
CHGBP05060 RPL23AP71-201ENST00000470966 469 ntBASIC5.23□□□□□ -1.57
CHGBP05060 ACTR3P3-201ENST00000480448 893 ntBASIC5.23□□□□□ -1.57
CHGBP05060 AC013828.1-201ENST00000481845 158 ntBASIC5.23□□□□□ -1.57
CHGBP05060 AC105914.1-201ENST00000511798 226 ntBASIC5.23□□□□□ -1.57
CHGBP05060 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.23□□□□□ -1.57
CHGBP05060 RNA5SP519-201ENST00000516480 119 ntBASIC5.23□□□□□ -1.57
CHGBP05060 RNU6-875P-201ENST00000516488 106 ntBASIC5.23□□□□□ -1.57
CHGBP05060 MTCO2P4-201ENST00000517968 247 ntBASIC5.23□□□□□ -1.57
CHGBP05060 HIGD1AP6-201ENST00000521833 279 ntBASIC5.23□□□□□ -1.57
CHGBP05060 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.23□□□□□ -1.57
CHGBP05060 AC109635.3-201ENST00000529536 185 ntBASIC5.23□□□□□ -1.57
CHGBP05060 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.23□□□□□ -1.57
CHGBP05060 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.23□□□□□ -1.57
CHGBP05060 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.23□□□□□ -1.57
CHGBP05060 AC009977.1-201ENST00000586015 570 ntBASIC5.23□□□□□ -1.57
CHGBP05060 AL590282.1-201ENST00000610379 1136 ntBASIC5.23□□□□□ -1.57
CHGBP05060 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHGBP05060 uc_338.13-201ENST00000618243 179 ntBASIC5.23□□□□□ -1.57
CHGBP05060 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHGBP05060 DBF4P1-201ENST00000412976 1892 ntBASIC5.23□□□□□ -1.57
CHGBP05060 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.23□□□□□ -1.57
CHGBP05060 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
CHGBP05060 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHGBP05060 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CHGBP05060 MAPK10-263ENST00000641052 4307 ntBASIC5.23□□□□□ -1.57
CHGBP05060 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.23□□□□□ -1.57
CHGBP05060 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHGBP05060 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHGBP05060 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.22□□□□□ -1.57
CHGBP05060 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.22□□□□□ -1.57
CHGBP05060 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHGBP05060 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHGBP05060 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHGBP05060 RNU6-181P-201ENST00000363225 107 ntBASIC5.22□□□□□ -1.57
CHGBP05060 RNY4P14-201ENST00000363656 96 ntBASIC5.22□□□□□ -1.57
CHGBP05060 RNU6-115P-201ENST00000364310 107 ntBASIC5.22□□□□□ -1.57
CHGBP05060 Y_RNA.295-201ENST00000364918 102 ntBASIC5.22□□□□□ -1.57
CHGBP05060 snosnR66.1-201ENST00000391095 99 ntBASIC5.22□□□□□ -1.57
CHGBP05060 SNRPEP2-201ENST00000397592 279 ntBASIC5.22□□□□□ -1.57
CHGBP05060 VN1R8P-201ENST00000407739 893 ntBASIC5.22□□□□□ -1.57
CHGBP05060 SNORA11F-201ENST00000408237 128 ntBASIC5.22□□□□□ -1.57
CHGBP05060 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.22□□□□□ -1.57
CHGBP05060 RNA5SP36-201ENST00000410197 133 ntBASIC5.22□□□□□ -1.57
CHGBP05060 RNU4-55P-201ENST00000410731 137 ntBASIC5.22□□□□□ -1.57
CHGBP05060 RNU6-195P-201ENST00000411352 109 ntBASIC5.22□□□□□ -1.57
CHGBP05060 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.22□□□□□ -1.57
CHGBP05060 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.22□□□□□ -1.57
CHGBP05060 AC012498.1-201ENST00000424037 437 ntBASIC5.22□□□□□ -1.57
CHGBP05060 AL157831.1-201ENST00000426134 473 ntBASIC5.22□□□□□ -1.57
CHGBP05060 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.22□□□□□ -1.57
CHGBP05060 LSM1P1-201ENST00000438629 273 ntBASIC5.22□□□□□ -1.57
CHGBP05060 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.22□□□□□ -1.57
CHGBP05060 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.22□□□□□ -1.57
CHGBP05060 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.22□□□□□ -1.57
CHGBP05060 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.22□□□□□ -1.57
CHGBP05060 AC010618.1-201ENST00000469924 477 ntBASIC5.22□□□□□ -1.57
CHGBP05060 AC109327.1-201ENST00000471666 403 ntBASIC5.22□□□□□ -1.57
CHGBP05060 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.22□□□□□ -1.57
CHGBP05060 AC021678.1-201ENST00000505195 936 ntBASIC5.22□□□□□ -1.57
CHGBP05060 RN7SKP46-201ENST00000515942 234 ntBASIC5.22□□□□□ -1.57
CHGBP05060 RNA5SP49-201ENST00000516450 115 ntBASIC5.22□□□□□ -1.57
CHGBP05060 IGKV2-36-201ENST00000519999 223 ntBASIC5.22□□□□□ -1.57
CHGBP05060 AC027309.2-201ENST00000520566 192 ntBASIC5.22□□□□□ -1.57
CHGBP05060 IGLV3-26-201ENST00000520756 302 ntBASIC5.22□□□□□ -1.57
CHGBP05060 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.22□□□□□ -1.57
CHGBP05060 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.22□□□□□ -1.57
CHGBP05060 MIR4284-201ENST00000578924 81 ntBASIC5.22□□□□□ -1.57
CHGBP05060 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.22□□□□□ -1.57
CHGBP05060 AC022916.3-201ENST00000592961 742 ntBASIC5.22□□□□□ -1.57
CHGBP05060 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.22□□□□□ -1.57
CHGBP05060 AL365503.1-201ENST00000605247 905 ntBASIC5.22□□□□□ -1.57
CHGBP05060 AC097468.3-201ENST00000607956 456 ntBASIC5.22□□□□□ -1.57
CHGBP05060 AL121757.2-201ENST00000611223 313 ntBASIC5.22□□□□□ -1.57
CHGBP05060 MIR7973-1-201ENST00000614683 76 ntBASIC5.22□□□□□ -1.57
CHGBP05060 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHGBP05060 AL445567.2-201ENST00000618935 498 ntBASIC5.22□□□□□ -1.57
CHGBP05060 AC012150.2-201ENST00000621300 544 ntBASIC5.22□□□□□ -1.57
CHGBP05060 AL359880.1-201ENST00000621879 266 ntBASIC5.22□□□□□ -1.57
CHGBP05060 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHGBP05060 MAPK10-349ENST00000641767 3661 ntBASIC5.22□□□□□ -1.57
CHGBP05060 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms