Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MTCO3P35-201ENST00000485582 781 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
PDGFBP01127 OR7E13P-201ENST00000526052 910 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 ZNF705CP-201ENST00000530515 889 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AC109635.4-202ENST00000531666 412 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.7□□□□□ -1.82
PDGFBP01127 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFBP01127 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.7□□□□□ -1.82
PDGFBP01127 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.7□□□□□ -1.82
PDGFBP01127 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.7□□□□□ -1.82
PDGFBP01127 AC006504.3-201ENST00000586818 523 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AP001542.2-201ENST00000593141 364 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 VN1R87P-201ENST00000596706 487 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFBP01127 AC103881.1-201ENST00000603476 538 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AL033523.1-201ENST00000605153 153 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AP002802.2-201ENST00000605877 235 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AC103710.3-201ENST00000608157 948 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AL590282.1-201ENST00000610379 1136 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AC090116.1-201ENST00000615679 446 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AC006963.1-201ENST00000624003 1052 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 AL512506.2-201ENST00000624472 458 ntBASIC3.7□□□□□ -1.82
PDGFBP01127 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFBP01127 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.7□□□□□ -1.82
PDGFBP01127 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDGFBP01127 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFBP01127 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PDGFBP01127 AC111188.2-201ENST00000529697 1387 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PDGFBP01127 RHOT1P2-201ENST00000366423 333 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 Y_RNA.578-201ENST00000390903 88 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 RPL21P66-201ENST00000426566 466 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 AC006548.1-201ENST00000427470 102 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFBP01127 AL645638.1-201ENST00000440519 361 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 RPL23AP16-201ENST00000441715 421 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 AC025750.2-201ENST00000442609 450 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 AC104073.1-201ENST00000451988 151 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFBP01127 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFBP01127 AC011825.1-201ENST00000484967 388 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.69□□□□□ -1.82
PDGFBP01127 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFBP01127 AC026414.1-201ENST00000504046 698 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 AC139783.2-201ENST00000504847 1145 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFBP01127 AC093752.1-206ENST00000511823 336 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 RNA5SP341-201ENST00000516261 117 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 AC091163.3-201ENST00000518269 1144 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 AC104417.1-201ENST00000523974 751 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.69□□□□□ -1.82
PDGFBP01127 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.69□□□□□ -1.82
PDGFBP01127 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.69□□□□□ -1.82
PDGFBP01127 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.69□□□□□ -1.82
PDGFBP01127 MIR5680-201ENST00000577577 84 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.69□□□□□ -1.82
PDGFBP01127 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.69□□□□□ -1.82
PDGFBP01127 BNIP3P40-201ENST00000596017 556 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.69□□□□□ -1.82
PDGFBP01127 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.69□□□□□ -1.82
PDGFBP01127 CR381572.1-201ENST00000625098 102 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.69□□□□□ -1.82
PDGFBP01127 ZNF663P-202ENST00000641770 1131 ntBASIC3.69□□□□□ -1.82
PDGFBP01127 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFBP01127 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFBP01127 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFBP01127 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFBP01127 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDGFBP01127 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.68□□□□□ -1.82
PDGFBP01127 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PDGFBP01127 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PDGFBP01127 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PDGFBP01127 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFBP01127 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFBP01127 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFBP01127 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PDGFBP01127 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.68□□□□□ -1.82
PDGFBP01127 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFBP01127 RNU6-1257P-201ENST00000384625 110 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 MTND4LP20-201ENST00000402379 270 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 VN1R8P-201ENST00000407739 893 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 SFR1P2-201ENST00000421841 730 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 MTCO2P23-201ENST00000425216 680 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.68□□□□□ -1.82
PDGFBP01127 MTCYBP15-201ENST00000433123 1127 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.68□□□□□ -1.82
PDGFBP01127 AC244505.3-201ENST00000454598 187 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.68□□□□□ -1.82
PDGFBP01127 MTCO3P2-201ENST00000457365 171 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFBP01127 AC104164.3-201ENST00000467363 1258 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms