Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RN7SL20P-201ENST00000488827 297 ntBASIC3.56□□□□□ -1.84
MBD3O95983 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.56□□□□□ -1.84
MBD3O95983 RNU5A-7P-201ENST00000515979 116 ntBASIC3.56□□□□□ -1.84
MBD3O95983 RN7SKP244-201ENST00000516513 307 ntBASIC3.56□□□□□ -1.84
MBD3O95983 AP001207.1-201ENST00000524051 481 ntBASIC3.56□□□□□ -1.84
MBD3O95983 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.56□□□□□ -1.84
MBD3O95983 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.56□□□□□ -1.84
MBD3O95983 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.56□□□□□ -1.84
MBD3O95983 MIR4666A-201ENST00000580160 79 ntBASIC3.56□□□□□ -1.84
MBD3O95983 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.56□□□□□ -1.84
MBD3O95983 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.56□□□□□ -1.84
MBD3O95983 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.56□□□□□ -1.84
MBD3O95983 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.56□□□□□ -1.84
MBD3O95983 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
MBD3O95983 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.56□□□□□ -1.84
MBD3O95983 Z83843.1-201ENST00000604070 3685 ntBASIC3.55□□□□□ -1.84
MBD3O95983 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.55□□□□□ -1.84
MBD3O95983 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
MBD3O95983 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
MBD3O95983 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
MBD3O95983 OR6K3-202ENST00000368146 996 ntBASIC3.55□□□□□ -1.84
MBD3O95983 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.55□□□□□ -1.84
MBD3O95983 AL359837.1-201ENST00000381357 287 ntBASIC3.55□□□□□ -1.84
MBD3O95983 MIR607-201ENST00000385241 96 ntBASIC3.55□□□□□ -1.84
MBD3O95983 HMGN1P24-201ENST00000412282 298 ntBASIC3.55□□□□□ -1.84
MBD3O95983 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.55□□□□□ -1.84
MBD3O95983 AL807761.1-201ENST00000417622 171 ntBASIC3.55□□□□□ -1.84
MBD3O95983 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.55□□□□□ -1.84
MBD3O95983 AL390023.1-201ENST00000428836 262 ntBASIC3.55□□□□□ -1.84
MBD3O95983 RPL21P112-201ENST00000434403 463 ntBASIC3.55□□□□□ -1.84
MBD3O95983 CYCSP43-201ENST00000438233 310 ntBASIC3.55□□□□□ -1.84
MBD3O95983 TPT1P12-201ENST00000448968 492 ntBASIC3.55□□□□□ -1.84
MBD3O95983 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.55□□□□□ -1.84
MBD3O95983 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.55□□□□□ -1.84
MBD3O95983 NDUFA5P9-201ENST00000472609 340 ntBASIC3.55□□□□□ -1.84
MBD3O95983 SYPL1P1-201ENST00000473622 768 ntBASIC3.55□□□□□ -1.84
MBD3O95983 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.55□□□□□ -1.84
MBD3O95983 AC026414.1-201ENST00000504046 698 ntBASIC3.55□□□□□ -1.84
MBD3O95983 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.55□□□□□ -1.84
MBD3O95983 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
MBD3O95983 RN7SKP21-201ENST00000516503 220 ntBASIC3.55□□□□□ -1.84
MBD3O95983 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.55□□□□□ -1.84
MBD3O95983 ARL2BPP5-201ENST00000523141 481 ntBASIC3.55□□□□□ -1.84
MBD3O95983 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.55□□□□□ -1.84
MBD3O95983 AP000619.3-201ENST00000535634 1127 ntBASIC3.55□□□□□ -1.84
MBD3O95983 AC006518.2-201ENST00000542513 940 ntBASIC3.55□□□□□ -1.84
MBD3O95983 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.55□□□□□ -1.84
MBD3O95983 NIFKP8-201ENST00000560500 874 ntBASIC3.55□□□□□ -1.84
MBD3O95983 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.55□□□□□ -1.84
MBD3O95983 AC083760.1-201ENST00000589621 670 ntBASIC3.55□□□□□ -1.84
MBD3O95983 CCDC58P3-201ENST00000590792 430 ntBASIC3.55□□□□□ -1.84
MBD3O95983 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.55□□□□□ -1.84
MBD3O95983 SNRPGP15-201ENST00000600149 222 ntBASIC3.55□□□□□ -1.84
MBD3O95983 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.55□□□□□ -1.84
MBD3O95983 RPL21P136-201ENST00000605378 396 ntBASIC3.55□□□□□ -1.84
MBD3O95983 MIR6748-201ENST00000610433 71 ntBASIC3.55□□□□□ -1.84
MBD3O95983 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.55□□□□□ -1.84
MBD3O95983 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.55□□□□□ -1.84
MBD3O95983 AC009093.8-201ENST00000641769 292 ntBASIC3.55□□□□□ -1.84
MBD3O95983 BX649567.1-201ENST00000642071 1134 ntBASIC3.55□□□□□ -1.84
MBD3O95983 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
MBD3O95983 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
MBD3O95983 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.55□□□□□ -1.84
MBD3O95983 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
MBD3O95983 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MBD3O95983 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.54□□□□□ -1.84
MBD3O95983 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.54□□□□□ -1.84
MBD3O95983 AP001148.1-201ENST00000624124 2359 ntBASIC3.54□□□□□ -1.84
MBD3O95983 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MBD3O95983 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD3O95983 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
MBD3O95983 OR1S2-201ENST00000302592 978 ntBASIC3.54□□□□□ -1.84
MBD3O95983 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MBD3O95983 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
MBD3O95983 RNU6-335P-201ENST00000364563 113 ntBASIC3.54□□□□□ -1.84
MBD3O95983 RNU6-921P-201ENST00000384361 107 ntBASIC3.54□□□□□ -1.84
MBD3O95983 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MBD3O95983 AL121972.1-201ENST00000402023 252 ntBASIC3.54□□□□□ -1.84
MBD3O95983 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD3O95983 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD3O95983 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.54□□□□□ -1.84
MBD3O95983 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.54□□□□□ -1.84
MBD3O95983 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.54□□□□□ -1.84
MBD3O95983 AL662791.1-201ENST00000441992 928 ntBASIC3.54□□□□□ -1.84
MBD3O95983 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD3O95983 RPL21P23-201ENST00000446654 460 ntBASIC3.54□□□□□ -1.84
MBD3O95983 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.54□□□□□ -1.84
MBD3O95983 NF1P3-201ENST00000457709 450 ntBASIC3.54□□□□□ -1.84
MBD3O95983 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
MBD3O95983 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.54□□□□□ -1.84
MBD3O95983 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.54□□□□□ -1.84
MBD3O95983 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.54□□□□□ -1.84
MBD3O95983 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.54□□□□□ -1.84
MBD3O95983 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MBD3O95983 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.54□□□□□ -1.84
MBD3O95983 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.54□□□□□ -1.84
MBD3O95983 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.54□□□□□ -1.84
MBD3O95983 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD3O95983 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.54□□□□□ -1.84
MBD3O95983 AC005412.1-201ENST00000580812 1049 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms