Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BEST1O76090 IPO8P1-201ENST00000455509 3109 ntBASIC4.01□□□□□ -1.77
BEST1O76090 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BEST1O76090 RNA5SP235-201ENST00000365411 114 ntBASIC4.01□□□□□ -1.77
BEST1O76090 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
BEST1O76090 RPL7P60-201ENST00000397636 735 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AL590704.1-201ENST00000402856 794 ntBASIC4.01□□□□□ -1.77
BEST1O76090 RAB9AP3-201ENST00000412737 573 ntBASIC4.01□□□□□ -1.77
BEST1O76090 TOMM22P1-201ENST00000418578 312 ntBASIC4.01□□□□□ -1.77
BEST1O76090 HMGB1P49-201ENST00000418882 569 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AC087650.1-201ENST00000431445 468 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AC096638.2-201ENST00000434965 711 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.01□□□□□ -1.77
BEST1O76090 NOTCH2P1-201ENST00000443481 624 ntBASIC4.01□□□□□ -1.77
BEST1O76090 RAB9AP1-201ENST00000449393 573 ntBASIC4.01□□□□□ -1.77
BEST1O76090 SNORA84-201ENST00000459229 133 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AC084198.1-201ENST00000477747 402 ntBASIC4.01□□□□□ -1.77
BEST1O76090 TMED11P-201ENST00000479478 690 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AC092451.1-201ENST00000480211 153 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AC020699.1-201ENST00000505161 445 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.01□□□□□ -1.77
BEST1O76090 AC006390.1-201ENST00000508068 283 ntBASIC4.01□□□□□ -1.77
BEST1O76090 XKRY-201ENST00000510392 1100 ntBASIC4.01□□□□□ -1.77
BEST1O76090 SNORA31.20-201ENST00000517111 133 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.01□□□□□ -1.77
BEST1O76090 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.01□□□□□ -1.77
BEST1O76090 AP001372.4-201ENST00000524889 472 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.01□□□□□ -1.77
BEST1O76090 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.01□□□□□ -1.77
BEST1O76090 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.01□□□□□ -1.77
BEST1O76090 AL512347.1-201ENST00000566420 503 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.01□□□□□ -1.77
BEST1O76090 MIR1254-2-201ENST00000579553 63 ntBASIC4.01□□□□□ -1.77
BEST1O76090 MAGOH2P-202ENST00000584384 429 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AC244505.7-201ENST00000599675 272 ntBASIC4.01□□□□□ -1.77
BEST1O76090 SNORA62.6-201ENST00000606322 83 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AC011816.2-201ENST00000607089 556 ntBASIC4.01□□□□□ -1.77
BEST1O76090 uc_338.32-201ENST00000615087 172 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AC025588.4-201ENST00000615802 908 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.01□□□□□ -1.77
BEST1O76090 AC018755.4-201ENST00000619715 454 ntBASIC4.01□□□□□ -1.77
BEST1O76090 RMST_9.1-201ENST00000619945 193 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AC004009.2-201ENST00000623016 728 ntBASIC4.01□□□□□ -1.77
BEST1O76090 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.01□□□□□ -1.77
BEST1O76090 AC116618.1-201ENST00000634617 774 ntBASIC4.01□□□□□ -1.77
BEST1O76090 AC006927.4-201ENST00000639187 543 ntBASIC4.01□□□□□ -1.77
BEST1O76090 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BEST1O76090 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
BEST1O76090 AL133383.2-201ENST00000622958 2336 ntBASIC4.01□□□□□ -1.77
BEST1O76090 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4□□□□□ -1.77
BEST1O76090 OR5BR1P-201ENST00000524992 1330 ntBASIC4□□□□□ -1.77
BEST1O76090 AC005539.1-201ENST00000443768 1479 ntBASIC4□□□□□ -1.77
BEST1O76090 AP004289.2-201ENST00000444413 1457 ntBASIC4□□□□□ -1.77
BEST1O76090 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4□□□□□ -1.77
BEST1O76090 AC008725.1-201ENST00000605123 2263 ntBASIC4□□□□□ -1.77
BEST1O76090 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BEST1O76090 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4□□□□□ -1.77
BEST1O76090 SNORD3H-201ENST00000384486 214 ntBASIC4□□□□□ -1.77
BEST1O76090 MIR554-201ENST00000384874 96 ntBASIC4□□□□□ -1.77
BEST1O76090 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4□□□□□ -1.77
BEST1O76090 AC099677.1-201ENST00000420575 175 ntBASIC4□□□□□ -1.77
BEST1O76090 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4□□□□□ -1.77
BEST1O76090 AL139421.1-201ENST00000423010 169 ntBASIC4□□□□□ -1.77
BEST1O76090 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4□□□□□ -1.77
BEST1O76090 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4□□□□□ -1.77
BEST1O76090 AC007389.2-201ENST00000434630 306 ntBASIC4□□□□□ -1.77
BEST1O76090 MTND2P19-201ENST00000449129 1012 ntBASIC4□□□□□ -1.77
BEST1O76090 MTCO3P11-201ENST00000455103 774 ntBASIC4□□□□□ -1.77
BEST1O76090 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4□□□□□ -1.77
BEST1O76090 USP9YP25-201ENST00000457708 443 ntBASIC4□□□□□ -1.77
BEST1O76090 AL133162.1-201ENST00000463228 453 ntBASIC4□□□□□ -1.77
BEST1O76090 AC010285.1-201ENST00000470580 392 ntBASIC4□□□□□ -1.77
BEST1O76090 TMEM251P1-201ENST00000503717 318 ntBASIC4□□□□□ -1.77
BEST1O76090 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4□□□□□ -1.77
BEST1O76090 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4□□□□□ -1.77
BEST1O76090 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4□□□□□ -1.77
BEST1O76090 AC110760.3-202ENST00000515177 371 ntBASIC4□□□□□ -1.77
BEST1O76090 RNU6-1073P-201ENST00000517182 106 ntBASIC4□□□□□ -1.77
BEST1O76090 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4□□□□□ -1.77
BEST1O76090 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4□□□□□ -1.77
BEST1O76090 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
BEST1O76090 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4□□□□□ -1.77
BEST1O76090 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4□□□□□ -1.77
BEST1O76090 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4□□□□□ -1.77
BEST1O76090 AC008638.3-201ENST00000603341 463 ntBASIC4□□□□□ -1.77
BEST1O76090 RNU1-30P-201ENST00000606575 163 ntBASIC4□□□□□ -1.77
BEST1O76090 AC006023.2-201ENST00000609916 167 ntBASIC4□□□□□ -1.77
BEST1O76090 AC005344.1-201ENST00000613391 459 ntBASIC4□□□□□ -1.77
BEST1O76090 AC012442.3-202ENST00000636742 206 ntBASIC4□□□□□ -1.77
BEST1O76090 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4□□□□□ -1.77
BEST1O76090 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4□□□□□ -1.77
BEST1O76090 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
BEST1O76090 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
BEST1O76090 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4□□□□□ -1.77
BEST1O76090 MFSD8-236ENST00000641509 4050 ntBASIC4□□□□□ -1.77
BEST1O76090 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BEST1O76090 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.99□□□□□ -1.77
BEST1O76090 AC024560.2-201ENST00000507981 1497 ntBASIC3.99□□□□□ -1.77
BEST1O76090 AC095050.2-201ENST00000510748 1458 ntBASIC3.99□□□□□ -1.77
BEST1O76090 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms