Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.39□□□□□ -1.39
PTCD1O75127 AC053481.3-201ENST00000577881 843 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 AC010680.4-201ENST00000605334 543 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 AL355802.3-201ENST00000607571 545 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 AC233309.1-201ENST00000619522 751 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 MIR6853-201ENST00000619642 74 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 RMST_7.1-201ENST00000621935 268 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 MIR1302-1-201ENST00000637932 143 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTCD1O75127 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTCD1O75127 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCD1O75127 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTCD1O75127 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.39□□□□□ -1.39
PTCD1O75127 AC091046.3-201ENST00000631455 1574 ntBASIC6.39□□□□□ -1.39
PTCD1O75127 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCD1O75127 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.39□□□□□ -1.39
PTCD1O75127 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTCD1O75127 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTCD1O75127 AC026951.1-201ENST00000559530 2459 ntBASIC6.38□□□□□ -1.39
PTCD1O75127 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCD1O75127 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCD1O75127 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.38□□□□□ -1.39
PTCD1O75127 RNU6-108P-201ENST00000365558 107 ntBASIC6.38□□□□□ -1.39
PTCD1O75127 RNU6-463P-201ENST00000384340 107 ntBASIC6.38□□□□□ -1.39
PTCD1O75127 AL356967.1-201ENST00000406305 431 ntBASIC6.38□□□□□ -1.39
PTCD1O75127 SNORA11-201ENST00000408789 128 ntBASIC6.38□□□□□ -1.39
PTCD1O75127 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.38□□□□□ -1.39
PTCD1O75127 AC018630.2-202ENST00000422992 927 ntBASIC6.38□□□□□ -1.39
PTCD1O75127 AC234779.1-201ENST00000425910 285 ntBASIC6.38□□□□□ -1.39
PTCD1O75127 RPL36AP53-201ENST00000432891 316 ntBASIC6.38□□□□□ -1.39
PTCD1O75127 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PTCD1O75127 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.38□□□□□ -1.39
PTCD1O75127 RNU7-63P-201ENST00000459054 62 ntBASIC6.38□□□□□ -1.39
PTCD1O75127 RPL7P19-201ENST00000469948 618 ntBASIC6.38□□□□□ -1.39
PTCD1O75127 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.38□□□□□ -1.39
PTCD1O75127 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.38□□□□□ -1.39
PTCD1O75127 AC017037.1-201ENST00000508460 471 ntBASIC6.38□□□□□ -1.39
PTCD1O75127 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.38□□□□□ -1.39
PTCD1O75127 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.38□□□□□ -1.39
PTCD1O75127 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.38□□□□□ -1.39
PTCD1O75127 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCD1O75127 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCD1O75127 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.38□□□□□ -1.39
PTCD1O75127 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC6.38□□□□□ -1.39
PTCD1O75127 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.38□□□□□ -1.39
PTCD1O75127 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.38□□□□□ -1.39
PTCD1O75127 MRPS21P9-201ENST00000571150 257 ntBASIC6.38□□□□□ -1.39
PTCD1O75127 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.38□□□□□ -1.39
PTCD1O75127 AC010525.2-201ENST00000590920 195 ntBASIC6.38□□□□□ -1.39
PTCD1O75127 AL354950.2-201ENST00000617939 290 ntBASIC6.38□□□□□ -1.39
PTCD1O75127 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
PTCD1O75127 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCD1O75127 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.38□□□□□ -1.39
PTCD1O75127 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCD1O75127 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PTCD1O75127 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCD1O75127 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCD1O75127 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCD1O75127 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PTCD1O75127 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCD1O75127 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.38□□□□□ -1.39
PTCD1O75127 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PTCD1O75127 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.37□□□□□ -1.39
PTCD1O75127 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PTCD1O75127 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PTCD1O75127 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PTCD1O75127 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PTCD1O75127 AL590240.1-201ENST00000334118 313 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 Y_RNA.146-201ENST00000363549 102 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 RNU6-1097P-201ENST00000363586 107 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 OR1L6-202ENST00000373684 1044 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 AC068538.1-201ENST00000376856 336 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 SNORA32.2-201ENST00000384049 122 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 RNU6-1160P-201ENST00000384546 104 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 MIR1-2-201ENST00000384961 85 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 AL354719.1-201ENST00000406535 843 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 AL031736.2-201ENST00000426573 787 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 SAR1AP4-201ENST00000429225 591 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.37□□□□□ -1.39
PTCD1O75127 CEACAMP6-201ENST00000452007 574 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 AL121877.1-201ENST00000453704 622 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 AC233702.1-201ENST00000482905 502 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 AC021146.2-201ENST00000504736 556 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 RNU6-277P-201ENST00000516272 106 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 snoU109.6-201ENST00000516831 118 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 RNU7-30P-201ENST00000516835 62 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.37□□□□□ -1.39
PTCD1O75127 OR5B19P-201ENST00000531766 928 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCD1O75127 TVP23CP2-201ENST00000571473 623 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PTCD1O75127 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.37□□□□□ -1.39
PTCD1O75127 AC098848.2-201ENST00000588023 330 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCD1O75127 AC093913.1-201ENST00000614178 329 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCD1O75127 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.37□□□□□ -1.39
PTCD1O75127 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCD1O75127 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PTCD1O75127 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms