Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 EEF1E1P1-201ENST00000446998 430 ntBASIC3.74□□□□□ -1.81
SSX4O60224 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX4O60224 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX4O60224 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX4O60224 AC010486.2-201ENST00000505572 483 ntBASIC3.74□□□□□ -1.81
SSX4O60224 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
SSX4O60224 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX4O60224 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
SSX4O60224 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX4O60224 NARSP2-201ENST00000518524 679 ntBASIC3.74□□□□□ -1.81
SSX4O60224 MTND2P38-201ENST00000522536 667 ntBASIC3.74□□□□□ -1.81
SSX4O60224 OR4R3P-201ENST00000525084 838 ntBASIC3.74□□□□□ -1.81
SSX4O60224 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX4O60224 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX4O60224 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX4O60224 ISCA1P3-201ENST00000577104 373 ntBASIC3.74□□□□□ -1.81
SSX4O60224 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX4O60224 AL596327.1-201ENST00000603629 213 ntBASIC3.74□□□□□ -1.81
SSX4O60224 AL591034.3-201ENST00000605511 685 ntBASIC3.74□□□□□ -1.81
SSX4O60224 AC080013.4-201ENST00000607624 649 ntBASIC3.74□□□□□ -1.81
SSX4O60224 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.74□□□□□ -1.81
SSX4O60224 AC006329.2-201ENST00000611491 394 ntBASIC3.74□□□□□ -1.81
SSX4O60224 C2orf27A-204ENST00000623058 969 ntBASIC3.74□□□□□ -1.81
SSX4O60224 AP000676.3-201ENST00000623299 569 ntBASIC3.74□□□□□ -1.81
SSX4O60224 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SSX4O60224 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX4O60224 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX4O60224 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX4O60224 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX4O60224 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX4O60224 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSX4O60224 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX4O60224 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSX4O60224 LINC00622-201ENST00000562811 1570 ntBASIC3.73□□□□□ -1.81
SSX4O60224 FAM91A3P-201ENST00000456826 2544 ntBASIC3.73□□□□□ -1.81
SSX4O60224 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSX4O60224 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSX4O60224 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.73□□□□□ -1.81
SSX4O60224 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
SSX4O60224 SPRR2C-201ENST00000290702 219 ntBASIC3.73□□□□□ -1.81
SSX4O60224 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SSX4O60224 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSX4O60224 CYCSP45-201ENST00000402289 315 ntBASIC3.73□□□□□ -1.81
SSX4O60224 AL356131.1-201ENST00000405826 414 ntBASIC3.73□□□□□ -1.81
SSX4O60224 RPS20P14-201ENST00000412545 360 ntBASIC3.73□□□□□ -1.81
SSX4O60224 OR4C10P-201ENST00000434991 931 ntBASIC3.73□□□□□ -1.81
SSX4O60224 UBE2D3P1-201ENST00000436669 444 ntBASIC3.73□□□□□ -1.81
SSX4O60224 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX4O60224 AL133217.1-201ENST00000450980 425 ntBASIC3.73□□□□□ -1.81
SSX4O60224 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.73□□□□□ -1.81
SSX4O60224 snoU13.3-201ENST00000459441 104 ntBASIC3.73□□□□□ -1.81
SSX4O60224 MEMO1P3-201ENST00000459811 302 ntBASIC3.73□□□□□ -1.81
SSX4O60224 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
SSX4O60224 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSX4O60224 AC041039.1-201ENST00000485656 536 ntBASIC3.73□□□□□ -1.81
SSX4O60224 RPL31P61-201ENST00000496160 376 ntBASIC3.73□□□□□ -1.81
SSX4O60224 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.73□□□□□ -1.81
SSX4O60224 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.73□□□□□ -1.81
SSX4O60224 BTF3L4P4-201ENST00000506381 449 ntBASIC3.73□□□□□ -1.81
SSX4O60224 SLC25A15P5-201ENST00000508033 253 ntBASIC3.73□□□□□ -1.81
SSX4O60224 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
SSX4O60224 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.73□□□□□ -1.81
SSX4O60224 AC010342.1-201ENST00000514047 877 ntBASIC3.73□□□□□ -1.81
SSX4O60224 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX4O60224 RNA5SP309-201ENST00000516670 106 ntBASIC3.73□□□□□ -1.81
SSX4O60224 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX4O60224 AC022861.1-201ENST00000522981 663 ntBASIC3.73□□□□□ -1.81
SSX4O60224 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.73□□□□□ -1.81
SSX4O60224 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX4O60224 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX4O60224 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX4O60224 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSX4O60224 AC007599.1-201ENST00000568688 1174 ntBASIC3.73□□□□□ -1.81
SSX4O60224 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.73□□□□□ -1.81
SSX4O60224 AC020914.6-201ENST00000594327 272 ntBASIC3.73□□□□□ -1.81
SSX4O60224 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX4O60224 AC004009.2-201ENST00000623016 728 ntBASIC3.73□□□□□ -1.81
SSX4O60224 AC040168.1-201ENST00000623594 991 ntBASIC3.73□□□□□ -1.81
SSX4O60224 AC140479.6-201ENST00000633535 357 ntBASIC3.73□□□□□ -1.81
SSX4O60224 MTND2P41-201ENST00000637599 773 ntBASIC3.73□□□□□ -1.81
SSX4O60224 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.73□□□□□ -1.81
SSX4O60224 Z82217.1-201ENST00000625157 8149 ntBASIC3.73□□□□□ -1.81
SSX4O60224 AL158163.1-201ENST00000603915 1649 ntBASIC3.73□□□□□ -1.81
SSX4O60224 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX4O60224 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX4O60224 AL022578.1-201ENST00000439330 1433 ntBASIC3.72□□□□□ -1.81
SSX4O60224 NOL8P1-201ENST00000508336 3529 ntBASIC3.72□□□□□ -1.81
SSX4O60224 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.72□□□□□ -1.81
SSX4O60224 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.72□□□□□ -1.81
SSX4O60224 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSX4O60224 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX4O60224 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SSX4O60224 RPL23AP57-201ENST00000332361 466 ntBASIC3.72□□□□□ -1.81
SSX4O60224 Y_RNA.169-201ENST00000363745 96 ntBASIC3.72□□□□□ -1.81
SSX4O60224 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSX4O60224 RNU6-253P-201ENST00000384730 105 ntBASIC3.72□□□□□ -1.81
SSX4O60224 MIR3065-201ENST00000390137 79 ntBASIC3.72□□□□□ -1.81
SSX4O60224 RNU6-952P-201ENST00000391164 108 ntBASIC3.72□□□□□ -1.81
SSX4O60224 RNU2-15P-201ENST00000410692 191 ntBASIC3.72□□□□□ -1.81
SSX4O60224 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms