Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SSNA1O43805 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SSNA1O43805 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SSNA1O43805 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SSNA1O43805 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SSNA1O43805 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.54□□□□□ -2
SSNA1O43805 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.54□□□□□ -2
SSNA1O43805 RNU6-441P-201ENST00000384545 106 ntBASIC2.54□□□□□ -2
SSNA1O43805 MIR181A2-201ENST00000384863 110 ntBASIC2.54□□□□□ -2
SSNA1O43805 SNORD17-201ENST00000390930 237 ntBASIC2.54□□□□□ -2
SSNA1O43805 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSNA1O43805 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SSNA1O43805 RPS4XP9-201ENST00000405151 780 ntBASIC2.54□□□□□ -2
SSNA1O43805 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC2.54□□□□□ -2
SSNA1O43805 RPL21P110-201ENST00000433345 446 ntBASIC2.54□□□□□ -2
SSNA1O43805 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.54□□□□□ -2
SSNA1O43805 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.54□□□□□ -2
SSNA1O43805 AL590664.1-201ENST00000448065 339 ntBASIC2.54□□□□□ -2
SSNA1O43805 RPL23AP31-201ENST00000456160 467 ntBASIC2.54□□□□□ -2
SSNA1O43805 RPL21P10-201ENST00000463521 490 ntBASIC2.54□□□□□ -2
SSNA1O43805 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.54□□□□□ -2
SSNA1O43805 DYNLL1P6-201ENST00000503440 264 ntBASIC2.54□□□□□ -2
SSNA1O43805 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.54□□□□□ -2
SSNA1O43805 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.54□□□□□ -2
SSNA1O43805 AC103843.2-201ENST00000530523 682 ntBASIC2.54□□□□□ -2
SSNA1O43805 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.54□□□□□ -2
SSNA1O43805 AP000857.1-201ENST00000532151 543 ntBASIC2.54□□□□□ -2
SSNA1O43805 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.54□□□□□ -2
SSNA1O43805 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSNA1O43805 AC053481.3-201ENST00000577881 843 ntBASIC2.54□□□□□ -2
SSNA1O43805 MIR5096-201ENST00000583713 70 ntBASIC2.54□□□□□ -2
SSNA1O43805 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.54□□□□□ -2
SSNA1O43805 AP000787.2-201ENST00000604432 568 ntBASIC2.54□□□□□ -2
SSNA1O43805 RPL23AP88-201ENST00000605759 454 ntBASIC2.54□□□□□ -2
SSNA1O43805 AC105227.2-201ENST00000615075 605 ntBASIC2.54□□□□□ -2
SSNA1O43805 AC009032.1-201ENST00000617574 431 ntBASIC2.54□□□□□ -2
SSNA1O43805 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.54□□□□□ -2
SSNA1O43805 AP000346.3-201ENST00000622821 210 ntBASIC2.54□□□□□ -2
SSNA1O43805 AC083865.1-201ENST00000636634 831 ntBASIC2.54□□□□□ -2
SSNA1O43805 AC139713.2-210ENST00000641741 992 ntBASIC2.54□□□□□ -2
SSNA1O43805 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
SSNA1O43805 AC006378.2-201ENST00000623178 2476 ntBASIC2.53□□□□□ -2
SSNA1O43805 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.53□□□□□ -2
SSNA1O43805 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SSNA1O43805 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.53□□□□□ -2
SSNA1O43805 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.53□□□□□ -2
SSNA1O43805 AC244517.1-201ENST00000606030 2086 ntBASIC2.53□□□□□ -2
SSNA1O43805 SPRR2C-201ENST00000290702 219 ntBASIC2.53□□□□□ -2
SSNA1O43805 AL121657.1-201ENST00000327215 531 ntBASIC2.53□□□□□ -2
SSNA1O43805 RNU1-109P-201ENST00000383960 147 ntBASIC2.53□□□□□ -2
SSNA1O43805 RNU6-821P-201ENST00000390995 107 ntBASIC2.53□□□□□ -2
SSNA1O43805 FAT1P1-201ENST00000406588 507 ntBASIC2.53□□□□□ -2
SSNA1O43805 SNORA11C-201ENST00000408532 129 ntBASIC2.53□□□□□ -2
SSNA1O43805 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.53□□□□□ -2
SSNA1O43805 RN7SKP220-201ENST00000410611 288 ntBASIC2.53□□□□□ -2
SSNA1O43805 RAP1BP1-201ENST00000412709 553 ntBASIC2.53□□□□□ -2
SSNA1O43805 UBE2V1P9-201ENST00000414760 368 ntBASIC2.53□□□□□ -2
SSNA1O43805 AL645937.1-202ENST00000421799 937 ntBASIC2.53□□□□□ -2
SSNA1O43805 RPS6P14-201ENST00000425165 719 ntBASIC2.53□□□□□ -2
SSNA1O43805 AC006455.6-201ENST00000426192 893 ntBASIC2.53□□□□□ -2
SSNA1O43805 AC096632.1-201ENST00000427395 310 ntBASIC2.53□□□□□ -2
SSNA1O43805 KCTD10P1-201ENST00000434203 625 ntBASIC2.53□□□□□ -2
SSNA1O43805 FABP5P3-201ENST00000437960 408 ntBASIC2.53□□□□□ -2
SSNA1O43805 RPL12P11-201ENST00000439970 501 ntBASIC2.53□□□□□ -2
SSNA1O43805 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.53□□□□□ -2
SSNA1O43805 XKRY2-201ENST00000442362 1093 ntBASIC2.53□□□□□ -2
SSNA1O43805 RPL21P89-201ENST00000444021 467 ntBASIC2.53□□□□□ -2
SSNA1O43805 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.53□□□□□ -2
SSNA1O43805 CDC27P1-201ENST00000445384 715 ntBASIC2.53□□□□□ -2
SSNA1O43805 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.53□□□□□ -2
SSNA1O43805 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.53□□□□□ -2
SSNA1O43805 AC073387.1-201ENST00000453261 709 ntBASIC2.53□□□□□ -2
SSNA1O43805 AP000705.1-201ENST00000454567 350 ntBASIC2.53□□□□□ -2
SSNA1O43805 AC034236.1-201ENST00000469891 373 ntBASIC2.53□□□□□ -2
SSNA1O43805 TSACC-207ENST00000470342 601 ntTSL 2 BASIC2.53□□□□□ -2
SSNA1O43805 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.53□□□□□ -2
SSNA1O43805 RPS29P2-201ENST00000479278 136 ntBASIC2.53□□□□□ -2
SSNA1O43805 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.53□□□□□ -2
SSNA1O43805 RN7SKP18-201ENST00000516005 275 ntBASIC2.53□□□□□ -2
SSNA1O43805 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.53□□□□□ -2
SSNA1O43805 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.53□□□□□ -2
SSNA1O43805 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.53□□□□□ -2
SSNA1O43805 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.53□□□□□ -2
SSNA1O43805 NBEAP1-201ENST00000554452 979 ntBASIC2.53□□□□□ -2
SSNA1O43805 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.53□□□□□ -2
SSNA1O43805 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.53□□□□□ -2
SSNA1O43805 MIR4276-201ENST00000584832 70 ntBASIC2.53□□□□□ -2
SSNA1O43805 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.53□□□□□ -2
SSNA1O43805 GLUD1P4-201ENST00000590914 418 ntBASIC2.53□□□□□ -2
SSNA1O43805 AC004696.1-201ENST00000614345 607 ntBASIC2.53□□□□□ -2
SSNA1O43805 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.53□□□□□ -2
SSNA1O43805 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
SSNA1O43805 CUL1P1-201ENST00000509510 2425 ntBASIC2.53□□□□□ -2
SSNA1O43805 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SSNA1O43805 ZNF90P1-201ENST00000480493 1951 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.52□□□□□ -2.01
SSNA1O43805 AC009501.3-201ENST00000605001 1352 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSNA1O43805 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
SSNA1O43805 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms