Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.88□□□□□ -1.63
PRPF3O43395 MIR432-201ENST00000606207 94 ntBASIC4.88□□□□□ -1.63
PRPF3O43395 AC067931.1-201ENST00000624190 671 ntBASIC4.88□□□□□ -1.63
PRPF3O43395 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF3O43395 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PRPF3O43395 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF3O43395 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF3O43395 AC015813.6-201ENST00000624409 5808 ntBASIC4.88□□□□□ -1.63
PRPF3O43395 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF3O43395 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
PRPF3O43395 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF3O43395 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
PRPF3O43395 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
PRPF3O43395 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF3O43395 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF3O43395 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF3O43395 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.87□□□□□ -1.63
PRPF3O43395 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF3O43395 RNA5SP258-201ENST00000362750 119 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 Y_RNA.201-201ENST00000364052 96 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 Y_RNA.493-201ENST00000384422 102 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 HSPD1P16-201ENST00000402302 394 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 RPL17P12-201ENST00000413391 526 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.87□□□□□ -1.63
PRPF3O43395 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.87□□□□□ -1.63
PRPF3O43395 MORF4L1P6-201ENST00000418771 268 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC016907.1-201ENST00000419483 435 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC092647.1-201ENST00000420654 287 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.87□□□□□ -1.63
PRPF3O43395 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.87□□□□□ -1.63
PRPF3O43395 AC007742.1-201ENST00000425789 329 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AL365184.2-201ENST00000431139 435 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 BTF3P10-201ENST00000433415 495 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.87□□□□□ -1.63
PRPF3O43395 ELOCP26-201ENST00000436067 329 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF3O43395 RPL23AP89-201ENST00000439324 255 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF3O43395 RPL7P52-201ENST00000449200 742 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF3O43395 AL445669.2-201ENST00000454425 421 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC010469.1-201ENST00000463864 576 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 MTND4LP3-201ENST00000468320 276 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC109327.1-201ENST00000471666 403 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AP001025.2-201ENST00000490908 477 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.87□□□□□ -1.63
PRPF3O43395 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.87□□□□□ -1.63
PRPF3O43395 AC108475.1-201ENST00000507880 950 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC099522.1-202ENST00000514718 367 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC116347.2-201ENST00000514912 523 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF3O43395 NDUFA5P2-201ENST00000519723 344 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF3O43395 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF3O43395 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF3O43395 TVP23BP1-201ENST00000557500 617 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF3O43395 MTCYBP33-201ENST00000575007 1130 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC011260.1-201ENST00000578420 472 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC083760.1-201ENST00000589621 670 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 BNIP3P23-201ENST00000599655 511 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 PRELID3BP8-201ENST00000604148 295 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC055876.5-201ENST00000605667 259 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC107214.2-201ENST00000608204 634 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AL031666.3-201ENST00000609320 1006 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC015813.4-201ENST00000610469 179 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC064801.1-201ENST00000612025 407 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC073114.1-201ENST00000612027 490 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AC011939.3-201ENST00000613686 466 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AL158063.1-201ENST00000615349 536 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 SNX18P1Y-201ENST00000616231 511 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF3O43395 AL445567.2-201ENST00000618935 498 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF3O43395 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.87□□□□□ -1.63
PRPF3O43395 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF3O43395 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF3O43395 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
PRPF3O43395 AC006378.2-201ENST00000623178 2476 ntBASIC4.86□□□□□ -1.63
PRPF3O43395 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.86□□□□□ -1.63
PRPF3O43395 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.86□□□□□ -1.63
PRPF3O43395 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.86□□□□□ -1.63
PRPF3O43395 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF3O43395 RNU6-1279P-201ENST00000383917 103 ntBASIC4.86□□□□□ -1.63
PRPF3O43395 SNORA26.8-201ENST00000391306 124 ntBASIC4.86□□□□□ -1.63
PRPF3O43395 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF3O43395 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.86□□□□□ -1.63
PRPF3O43395 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.86□□□□□ -1.63
PRPF3O43395 Z97055.1-201ENST00000419730 712 ntBASIC4.86□□□□□ -1.63
PRPF3O43395 MRPS18BP2-201ENST00000434310 759 ntBASIC4.86□□□□□ -1.63
PRPF3O43395 KATNBL1P6-201ENST00000453433 915 ntBASIC4.86□□□□□ -1.63
PRPF3O43395 ZNF114P1-201ENST00000453500 292 ntBASIC4.86□□□□□ -1.63
PRPF3O43395 RPL30P9-201ENST00000465586 330 ntBASIC4.86□□□□□ -1.63
PRPF3O43395 UQCRHP4-201ENST00000471686 272 ntBASIC4.86□□□□□ -1.63
PRPF3O43395 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.86□□□□□ -1.63
PRPF3O43395 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.86□□□□□ -1.63
PRPF3O43395 AC006499.6-201ENST00000511169 607 ntBASIC4.86□□□□□ -1.63
PRPF3O43395 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.86□□□□□ -1.63
PRPF3O43395 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF3O43395 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms