Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
HMGB3O15347 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.37□□□□□ -2.03
HMGB3O15347 MTND5P4-201ENST00000514978 288 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.37□□□□□ -2.03
HMGB3O15347 TRMT10BP1-201ENST00000519377 943 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 AC022616.2-201ENST00000523185 300 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGB3O15347 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.37□□□□□ -2.03
HMGB3O15347 OR4A45P-201ENST00000529954 901 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.37□□□□□ -2.03
HMGB3O15347 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HMGB3O15347 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGB3O15347 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGB3O15347 AC034105.3-201ENST00000565294 442 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 MTCYBP28-201ENST00000566728 1132 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGB3O15347 COX6CP3-201ENST00000580869 223 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 AL451086.1-201ENST00000605596 223 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 AC015849.2-201ENST00000605738 409 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGB3O15347 AC110792.4-201ENST00000609843 298 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 AC090115.4-201ENST00000609970 188 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HMGB3O15347 AC007275.1-201ENST00000621243 671 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGB3O15347 AC243312.2-201ENST00000623340 601 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 AC024023.1-201ENST00000624530 922 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
HMGB3O15347 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HMGB3O15347 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HMGB3O15347 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.37□□□□□ -2.03
HMGB3O15347 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HMGB3O15347 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
HMGB3O15347 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGB3O15347 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HMGB3O15347 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.36□□□□□ -2.03
HMGB3O15347 AL512646.1-201ENST00000269395 1077 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGB3O15347 RNU1-100P-201ENST00000365255 165 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 SNORD15B-201ENST00000384714 146 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 GSTA8P-201ENST00000404253 637 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HMGB3O15347 RPL21P32-201ENST00000419877 477 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGB3O15347 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGB3O15347 AC122718.1-201ENST00000439448 744 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.36□□□□□ -2.03
HMGB3O15347 RPL21P23-201ENST00000446654 460 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 AL034418.1-201ENST00000448675 860 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGB3O15347 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGB3O15347 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGB3O15347 ERHP1-201ENST00000523006 310 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 OR5G4P-201ENST00000525251 760 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.36□□□□□ -2.03
HMGB3O15347 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.36□□□□□ -2.03
HMGB3O15347 ELOCP31-201ENST00000540463 467 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGB3O15347 CR383656.14-201ENST00000551951 406 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGB3O15347 RPL21P12-201ENST00000559810 515 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGB3O15347 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.36□□□□□ -2.03
HMGB3O15347 RN7SL339P-201ENST00000580597 296 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGB3O15347 AC020895.1-201ENST00000595362 272 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 AC245036.5-201ENST00000596330 847 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGB3O15347 AL121772.2-201ENST00000614331 297 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 AC105227.2-201ENST00000615075 605 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 AC007318.2-201ENST00000620999 243 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 AC009039.2-201ENST00000624524 529 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 AC009093.8-201ENST00000641769 292 ntBASIC2.36□□□□□ -2.03
HMGB3O15347 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGB3O15347 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGB3O15347 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
HMGB3O15347 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HMGB3O15347 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HMGB3O15347 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HMGB3O15347 MIR421-201ENST00000365696 85 ntBASIC2.35□□□□□ -2.03
HMGB3O15347 SNORA5A-201ENST00000384111 134 ntBASIC2.35□□□□□ -2.03
HMGB3O15347 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HMGB3O15347 AL357075.1-201ENST00000404107 726 ntBASIC2.35□□□□□ -2.03
HMGB3O15347 MIR1303-201ENST00000408625 86 ntBASIC2.35□□□□□ -2.03
HMGB3O15347 AC073264.1-201ENST00000411508 416 ntBASIC2.35□□□□□ -2.03
HMGB3O15347 BX682237.1-201ENST00000415016 335 ntBASIC2.35□□□□□ -2.03
HMGB3O15347 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGB3O15347 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.35□□□□□ -2.03
HMGB3O15347 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGB3O15347 AL445584.1-201ENST00000431451 330 ntBASIC2.35□□□□□ -2.03
HMGB3O15347 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGB3O15347 LSM1P1-201ENST00000438629 273 ntBASIC2.35□□□□□ -2.03
HMGB3O15347 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.35□□□□□ -2.03
HMGB3O15347 RPS17P11-201ENST00000474297 293 ntBASIC2.35□□□□□ -2.03
HMGB3O15347 RPL21P13-201ENST00000488305 481 ntBASIC2.35□□□□□ -2.03
HMGB3O15347 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGB3O15347 DSTNP2-201ENST00000504533 515 ntBASIC2.35□□□□□ -2.03
HMGB3O15347 FABP5P6-201ENST00000510588 409 ntBASIC2.35□□□□□ -2.03
HMGB3O15347 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms