Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 EEF1A1P1-201ENST00000447052 739 ntBASIC5.67□□□□□ -1.5
SOX1O00570 RNU7-182P-201ENST00000459009 62 ntBASIC5.67□□□□□ -1.5
SOX1O00570 AC126389.1-201ENST00000477436 290 ntBASIC5.67□□□□□ -1.5
SOX1O00570 AL135752.1-201ENST00000479477 471 ntBASIC5.67□□□□□ -1.5
SOX1O00570 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.67□□□□□ -1.5
SOX1O00570 AC025164.1-201ENST00000496249 478 ntBASIC5.67□□□□□ -1.5
SOX1O00570 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.67□□□□□ -1.5
SOX1O00570 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SOX1O00570 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.67□□□□□ -1.5
SOX1O00570 COPS8P3-201ENST00000526024 482 ntBASIC5.67□□□□□ -1.5
SOX1O00570 AC011979.2-201ENST00000527568 352 ntBASIC5.67□□□□□ -1.5
SOX1O00570 APOOP3-201ENST00000536787 586 ntBASIC5.67□□□□□ -1.5
SOX1O00570 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.67□□□□□ -1.5
SOX1O00570 AL117187.1-201ENST00000555482 181 ntBASIC5.67□□□□□ -1.5
SOX1O00570 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.67□□□□□ -1.5
SOX1O00570 AC060771.1-201ENST00000582031 164 ntBASIC5.67□□□□□ -1.5
SOX1O00570 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX1O00570 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.67□□□□□ -1.5
SOX1O00570 AL512782.1-201ENST00000603093 364 ntBASIC5.67□□□□□ -1.5
SOX1O00570 AC010680.4-201ENST00000605334 543 ntBASIC5.67□□□□□ -1.5
SOX1O00570 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX1O00570 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX1O00570 AC244517.12-201ENST00000623581 663 ntBASIC5.67□□□□□ -1.5
SOX1O00570 AC020656.2-201ENST00000613291 5309 ntBASIC5.67□□□□□ -1.5
SOX1O00570 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SOX1O00570 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.67□□□□□ -1.5
SOX1O00570 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SOX1O00570 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SOX1O00570 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SOX1O00570 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SOX1O00570 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX1O00570 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.66□□□□□ -1.5
SOX1O00570 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SOX1O00570 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SOX1O00570 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.66□□□□□ -1.5
SOX1O00570 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
SOX1O00570 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SOX1O00570 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.66□□□□□ -1.5
SOX1O00570 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SOX1O00570 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.66□□□□□ -1.5
SOX1O00570 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SOX1O00570 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SOX1O00570 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.66□□□□□ -1.5
SOX1O00570 RNA5SP28-201ENST00000363841 119 ntBASIC5.66□□□□□ -1.5
SOX1O00570 RNU6-1318P-201ENST00000365389 103 ntBASIC5.66□□□□□ -1.5
SOX1O00570 RNY3P13-201ENST00000365542 102 ntBASIC5.66□□□□□ -1.5
SOX1O00570 MIR558-201ENST00000384920 94 ntBASIC5.66□□□□□ -1.5
SOX1O00570 MIR670-201ENST00000390142 98 ntBASIC5.66□□□□□ -1.5
SOX1O00570 CISD1P1-201ENST00000393907 327 ntBASIC5.66□□□□□ -1.5
SOX1O00570 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SOX1O00570 RNU2-29P-201ENST00000410423 189 ntBASIC5.66□□□□□ -1.5
SOX1O00570 RNA5SP345-201ENST00000410646 108 ntBASIC5.66□□□□□ -1.5
SOX1O00570 RN7SKP58-201ENST00000411010 305 ntBASIC5.66□□□□□ -1.5
SOX1O00570 RNU2-22P-201ENST00000411266 212 ntBASIC5.66□□□□□ -1.5
SOX1O00570 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.66□□□□□ -1.5
SOX1O00570 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SOX1O00570 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.66□□□□□ -1.5
SOX1O00570 RPL36P19-201ENST00000430744 301 ntBASIC5.66□□□□□ -1.5
SOX1O00570 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.66□□□□□ -1.5
SOX1O00570 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.66□□□□□ -1.5
SOX1O00570 UBE2V1P13-201ENST00000436983 439 ntBASIC5.66□□□□□ -1.5
SOX1O00570 AL137792.2-201ENST00000443484 235 ntBASIC5.66□□□□□ -1.5
SOX1O00570 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.66□□□□□ -1.5
SOX1O00570 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.66□□□□□ -1.5
SOX1O00570 snoU13.8-201ENST00000458890 104 ntBASIC5.66□□□□□ -1.5
SOX1O00570 AP005435.4-201ENST00000529514 284 ntBASIC5.66□□□□□ -1.5
SOX1O00570 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.66□□□□□ -1.5
SOX1O00570 OR5B10P-201ENST00000532869 642 ntBASIC5.66□□□□□ -1.5
SOX1O00570 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.66□□□□□ -1.5
SOX1O00570 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.66□□□□□ -1.5
SOX1O00570 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.66□□□□□ -1.5
SOX1O00570 MIR4298-201ENST00000584380 73 ntBASIC5.66□□□□□ -1.5
SOX1O00570 UBE2L4-201ENST00000587688 464 ntBASIC5.66□□□□□ -1.5
SOX1O00570 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.66□□□□□ -1.5
SOX1O00570 AL356218.2-201ENST00000605264 187 ntBASIC5.66□□□□□ -1.5
SOX1O00570 AP000654.2-201ENST00000605633 586 ntBASIC5.66□□□□□ -1.5
SOX1O00570 AL121992.2-201ENST00000606262 256 ntBASIC5.66□□□□□ -1.5
SOX1O00570 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.66□□□□□ -1.5
SOX1O00570 AC034229.5-201ENST00000624258 185 ntBASIC5.66□□□□□ -1.5
SOX1O00570 AL159972.1-201ENST00000625150 448 ntBASIC5.66□□□□□ -1.5
SOX1O00570 MTND4P14-201ENST00000435799 1354 ntBASIC5.66□□□□□ -1.5
SOX1O00570 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SOX1O00570 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
SOX1O00570 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SOX1O00570 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SOX1O00570 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SOX1O00570 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.65□□□□□ -1.5
SOX1O00570 AC097063.1-201ENST00000426714 1797 ntBASIC5.65□□□□□ -1.5
SOX1O00570 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SOX1O00570 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SOX1O00570 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SOX1O00570 AL139276.1-201ENST00000311910 1001 ntBASIC5.65□□□□□ -1.5
SOX1O00570 Y_RNA.22-201ENST00000362492 102 ntBASIC5.65□□□□□ -1.5
SOX1O00570 RNU6-552P-201ENST00000362869 119 ntBASIC5.65□□□□□ -1.5
SOX1O00570 RNU6-97P-201ENST00000363387 104 ntBASIC5.65□□□□□ -1.5
SOX1O00570 RNU1-146P-201ENST00000364015 165 ntBASIC5.65□□□□□ -1.5
SOX1O00570 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.65□□□□□ -1.5
SOX1O00570 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.65□□□□□ -1.5
SOX1O00570 RNU6-39P-201ENST00000384344 107 ntBASIC5.65□□□□□ -1.5
SOX1O00570 MIR568-201ENST00000385036 95 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms