Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CACNA1AO00555 GSTM3P2-201ENST00000412746 530 ntBASIC2.58□□□□□ -2
CACNA1AO00555 RANP4-201ENST00000413361 655 ntBASIC2.58□□□□□ -2
CACNA1AO00555 RANP7-201ENST00000418085 644 ntBASIC2.58□□□□□ -2
CACNA1AO00555 HMGB1P12-201ENST00000438594 598 ntBASIC2.58□□□□□ -2
CACNA1AO00555 AC078817.1-201ENST00000492623 435 ntBASIC2.58□□□□□ -2
CACNA1AO00555 USP9YP2-201ENST00000504503 1000 ntBASIC2.58□□□□□ -2
CACNA1AO00555 USP9YP1-201ENST00000513521 1002 ntBASIC2.58□□□□□ -2
CACNA1AO00555 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC2.58□□□□□ -2
CACNA1AO00555 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.58□□□□□ -2
CACNA1AO00555 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.58□□□□□ -2
CACNA1AO00555 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CACNA1AO00555 FCF1P1-201ENST00000432690 571 ntBASIC2.58□□□□□ -2
CACNA1AO00555 MTCO1P52-201ENST00000433928 531 ntBASIC2.58□□□□□ -2
CACNA1AO00555 ELOCP8-201ENST00000439309 332 ntBASIC2.58□□□□□ -2
CACNA1AO00555 ELOCP15-201ENST00000442090 332 ntBASIC2.58□□□□□ -2
CACNA1AO00555 Z99127.3-201ENST00000448158 395 ntBASIC2.58□□□□□ -2
CACNA1AO00555 MRPS31P2-201ENST00000451581 518 ntBASIC2.58□□□□□ -2
CACNA1AO00555 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.58□□□□□ -2
CACNA1AO00555 AC010928.3-201ENST00000587712 541 ntBASIC2.58□□□□□ -2
CACNA1AO00555 AC068313.1-201ENST00000604028 1008 ntBASIC2.58□□□□□ -2
CACNA1AO00555 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.58□□□□□ -2
CACNA1AO00555 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.57□□□□□ -2
CACNA1AO00555 SNORA51.12-201ENST00000384448 134 ntBASIC2.57□□□□□ -2
CACNA1AO00555 AL512633.1-201ENST00000399931 655 ntBASIC2.57□□□□□ -2
CACNA1AO00555 AP000893.1-201ENST00000474462 794 ntBASIC2.57□□□□□ -2
CACNA1AO00555 IGLV3-17-201ENST00000519099 244 ntBASIC2.57□□□□□ -2
CACNA1AO00555 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.57□□□□□ -2
CACNA1AO00555 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
CACNA1AO00555 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CACNA1AO00555 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
CACNA1AO00555 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CACNA1AO00555 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.57□□□□□ -2
CACNA1AO00555 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CACNA1AO00555 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CACNA1AO00555 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.57□□□□□ -2
CACNA1AO00555 RNU6-115P-201ENST00000364310 107 ntBASIC2.57□□□□□ -2
CACNA1AO00555 U3.23-201ENST00000391132 200 ntBASIC2.57□□□□□ -2
CACNA1AO00555 HMGB3P18-201ENST00000406327 590 ntBASIC2.57□□□□□ -2
CACNA1AO00555 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.57□□□□□ -2
CACNA1AO00555 KATNBL1P2-201ENST00000433311 835 ntBASIC2.57□□□□□ -2
CACNA1AO00555 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.57□□□□□ -2
CACNA1AO00555 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.57□□□□□ -2
CACNA1AO00555 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.57□□□□□ -2
CACNA1AO00555 BTF3L4P4-201ENST00000506381 449 ntBASIC2.57□□□□□ -2
CACNA1AO00555 AC234781.5-201ENST00000508429 271 ntBASIC2.57□□□□□ -2
CACNA1AO00555 AC009318.2-201ENST00000610917 651 ntBASIC2.57□□□□□ -2
CACNA1AO00555 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
CACNA1AO00555 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CACNA1AO00555 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CACNA1AO00555 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.56□□□□□ -2
CACNA1AO00555 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
CACNA1AO00555 RPL7P54-201ENST00000438336 674 ntBASIC2.56□□□□□ -2
CACNA1AO00555 RPL12P26-201ENST00000452430 487 ntBASIC2.56□□□□□ -2
CACNA1AO00555 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.56□□□□□ -2
CACNA1AO00555 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.56□□□□□ -2
CACNA1AO00555 AC108471.1-201ENST00000513977 287 ntBASIC2.56□□□□□ -2
CACNA1AO00555 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.56□□□□□ -2
CACNA1AO00555 AC007536.1-201ENST00000533382 349 ntBASIC2.56□□□□□ -2
CACNA1AO00555 AC010546.1-201ENST00000569391 485 ntBASIC2.56□□□□□ -2
CACNA1AO00555 AC011472.4-201ENST00000615848 491 ntBASIC2.56□□□□□ -2
CACNA1AO00555 SAGE4P-201ENST00000442271 3381 ntBASIC2.56□□□□□ -2
CACNA1AO00555 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC2.56□□□□□ -2
CACNA1AO00555 HSPA8P1-201ENST00000425843 1833 ntBASIC2.56□□□□□ -2
CACNA1AO00555 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.56□□□□□ -2
CACNA1AO00555 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC2.56□□□□□ -2
CACNA1AO00555 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.56□□□□□ -2
CACNA1AO00555 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC2.56□□□□□ -2
CACNA1AO00555 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.56□□□□□ -2
CACNA1AO00555 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.56□□□□□ -2
CACNA1AO00555 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC2.56□□□□□ -2
CACNA1AO00555 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.56□□□□□ -2
CACNA1AO00555 BX248123.2-201ENST00000606318 124 ntBASIC2.56□□□□□ -2
CACNA1AO00555 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC2.55□□□□□ -2
CACNA1AO00555 TAB3P1-202ENST00000452645 1634 ntBASIC2.55□□□□□ -2
CACNA1AO00555 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CACNA1AO00555 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
CACNA1AO00555 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
CACNA1AO00555 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.55□□□□□ -2
CACNA1AO00555 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
CACNA1AO00555 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.55□□□□□ -2
CACNA1AO00555 AC090525.1-201ENST00000479116 478 ntBASIC2.55□□□□□ -2
CACNA1AO00555 AC243972.3-201ENST00000539655 198 ntBASIC2.55□□□□□ -2
CACNA1AO00555 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC2.55□□□□□ -2
CACNA1AO00555 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CACNA1AO00555 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.54□□□□□ -2
CACNA1AO00555 EI24P2-201ENST00000397776 1076 ntBASIC2.54□□□□□ -2
CACNA1AO00555 AL356057.3-201ENST00000402607 340 ntBASIC2.54□□□□□ -2
CACNA1AO00555 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.54□□□□□ -2
CACNA1AO00555 VN1R108P-201ENST00000431580 830 ntBASIC2.54□□□□□ -2
CACNA1AO00555 TRBV26-201ENST00000456572 344 ntBASIC2.54□□□□□ -2
CACNA1AO00555 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.54□□□□□ -2
CACNA1AO00555 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.54□□□□□ -2
CACNA1AO00555 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.54□□□□□ -2
CACNA1AO00555 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.54□□□□□ -2
CACNA1AO00555 AC103810.6-201ENST00000606708 136 ntBASIC2.54□□□□□ -2
CACNA1AO00555 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.54□□□□□ -2
CACNA1AO00555 AC010480.1-201ENST00000624823 684 ntBASIC2.54□□□□□ -2
CACNA1AO00555 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.54□□□□□ -2
CACNA1AO00555 AC021382.1-201ENST00000483523 359 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms