Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AL359535.1-201ENST00000612100 1087 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC090510.2-201ENST00000617465 629 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AL133370.2-201ENST00000619934 439 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC095031.1-201ENST00000623685 672 ntBASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CHKB-CPT1BH3BT56 AC009902.3-201ENST00000606235 2172 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AC022336.2-201ENST00000568966 2538 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 RNU6-461P-201ENST00000364195 107 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 SNORA6-201ENST00000384033 151 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 SNORA51.11-201ENST00000384442 131 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 SNORA70C-201ENST00000384538 135 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AL022722.2-201ENST00000402519 180 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AL355497.1-201ENST00000406262 551 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 FAT1P1-201ENST00000406588 507 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 U3.40-201ENST00000408706 208 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AL356379.1-201ENST00000414105 126 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AL356320.2-201ENST00000417263 507 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 RPL7P30-201ENST00000420888 709 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 ATP6V0E1P4-201ENST00000427294 242 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 SRIP2-201ENST00000428470 166 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 RPL7P61-201ENST00000451721 751 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 RPL7P15-201ENST00000461190 712 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 RPS27P21-201ENST00000486977 252 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AC093763.2-201ENST00000505334 1223 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AC010460.1-201ENST00000507087 466 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 HIGD1AP18-201ENST00000520730 278 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AP000889.2-201ENST00000532684 490 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AL355836.1-201ENST00000555951 870 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 RPL21P12-201ENST00000559810 515 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 PRELID3BP8-201ENST00000604148 295 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AL445222.1-201ENST00000607259 628 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AL354798.1-201ENST00000622505 329 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 AC139713.2-210ENST00000641741 992 ntBASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CHKB-CPT1BH3BT56 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC004944.1-201ENST00000517807 3059 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 RNU6-618P-201ENST00000363518 112 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 SNORA9.2-201ENST00000365361 133 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AL359837.1-201ENST00000381357 287 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC092642.1-201ENST00000392417 425 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 ATP5F1P3-201ENST00000397213 657 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 MIR1193-201ENST00000408109 78 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 RPS20P25-201ENST00000412447 352 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC234782.4-201ENST00000417646 1048 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC114973.1-201ENST00000429057 632 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 WARS2P1-201ENST00000429678 537 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 MRPS33P4-201ENST00000434892 317 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 MTCYBP34-201ENST00000439552 670 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 RPS12P2-201ENST00000439728 269 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 ATP6V0E1P2-201ENST00000441771 245 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 RPS15AP29-201ENST00000445539 400 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 Z95327.1-201ENST00000446082 482 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AL513533.1-201ENST00000453728 415 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AL135752.1-201ENST00000479477 471 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms