Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC116096.1-201ENST00000566804 2314 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 MIR3690-201ENST00000580266 75 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AL137849.1-201ENST00000604767 169 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC024060.1-201ENST00000607052 494 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC073968.1-201ENST00000618594 637 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 CR381572.1-201ENST00000625098 102 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 AC099654.9-201ENST00000637055 678 ntBASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPA2E9PIF3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC092326.2-201ENST00000624772 1561 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 RNU5E-10P-201ENST00000363506 118 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 RNU6-730P-201ENST00000383954 104 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 RNU6-629P-201ENST00000384061 103 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 MIR591-201ENST00000385290 95 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 RNU6-1300P-201ENST00000391046 108 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 MTND4LP20-201ENST00000402379 270 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 SYF2P2-201ENST00000417620 583 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC068533.1-201ENST00000418542 415 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AIMP1P1-201ENST00000418670 937 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 KRR1P1-201ENST00000419430 803 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 MTCO3P1-205ENST00000422088 832 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 HSFY1P1-201ENST00000423928 1178 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AL035410.1-201ENST00000427409 427 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 MTCO1P3-201ENST00000429327 192 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 VDAC1P3-201ENST00000434069 851 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 MRPS18BP2-201ENST00000434310 759 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC241584.1-201ENST00000438469 1241 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AF228730.2-201ENST00000438784 848 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 MTCO1P53-201ENST00000441633 699 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC079776.3-201ENST00000450665 370 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 PRSS3P4-201ENST00000453323 162 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 snoU109.3-201ENST00000459477 145 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC084198.1-201ENST00000477747 402 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC119751.4-201ENST00000507498 357 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 MTATP6P9-201ENST00000515039 680 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 SNORA48.10-201ENST00000516965 160 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 RNU6-1073P-201ENST00000517182 106 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 SUMO2P20-201ENST00000520803 283 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC109635.4-202ENST00000531666 412 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC090425.2-201ENST00000608818 501 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC092954.1-201ENST00000609121 445 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC123767.1-202ENST00000620407 817 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC092628.2-201ENST00000622492 339 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AL157770.1-201ENST00000623049 439 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 AC091905.1-201ENST00000624400 311 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 MFSD8-236ENST00000641509 4050 ntBASIC3.39□□□□□ -1.87
NPIPA2E9PIF3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 SNORD65.1-201ENST00000390889 71 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 RPL7P60-201ENST00000397636 735 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 SNORA11.1-201ENST00000408133 129 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 OR4K6P-201ENST00000416478 897 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 FNDC3CP-201ENST00000420795 1155 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms