Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SRRM4A7MD48 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SRRM4A7MD48 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SRRM4A7MD48 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SRRM4A7MD48 AL161781.1-201ENST00000354277 403 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 RNA5SP322-201ENST00000363617 119 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 SNORA4.1-201ENST00000364263 144 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 RNU4-40P-201ENST00000364351 143 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 RNU11-4P-201ENST00000391149 133 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 RPL23AP48-201ENST00000406913 488 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AL603766.1-201ENST00000407763 664 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 RN7SKP33-201ENST00000410942 340 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC245052.5-201ENST00000416320 649 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 RPL23AP38-201ENST00000423801 469 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 RPL21P66-201ENST00000426566 466 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 ZYG11AP1-201ENST00000430329 837 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SRRM4A7MD48 AF228730.2-201ENST00000438784 848 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 RPL7P52-201ENST00000449200 742 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC005297.2-201ENST00000450430 606 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 snoU13.8-201ENST00000458890 104 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC020593.1-201ENST00000507399 299 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 RNU6-1095P-201ENST00000516148 108 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 SNORA31.20-201ENST00000517111 133 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 RNU6-1073P-201ENST00000517182 106 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 UBTFL10-201ENST00000528532 562 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 CR383656.6-201ENST00000550518 394 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SRRM4A7MD48 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 AL031176.1-201ENST00000604554 466 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AL049634.3-201ENST00000604968 457 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 ARF4P1-201ENST00000605447 541 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC128687.2-201ENST00000609657 566 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AL445567.2-201ENST00000618935 498 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC018755.4-201ENST00000619715 454 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC007490.1-201ENST00000624321 703 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC048347.1-201ENST00000624621 427 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC079228.1-201ENST00000624774 1049 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SRRM4A7MD48 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 AC104454.1-201ENST00000421341 1401 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SRRM4A7MD48 FAM35DP-201ENST00000323387 2712 ntBASIC3.24□□□□□ -1.89
SRRM4A7MD48 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.24□□□□□ -1.89
SRRM4A7MD48 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SRRM4A7MD48 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SRRM4A7MD48 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SRRM4A7MD48 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SRRM4A7MD48 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
SRRM4A7MD48 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SRRM4A7MD48 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.23□□□□□ -1.89
SRRM4A7MD48 OR11H4-201ENST00000315409 1082 ntBASIC3.23□□□□□ -1.89
SRRM4A7MD48 SNORA60-201ENST00000362396 134 ntBASIC3.23□□□□□ -1.89
SRRM4A7MD48 SNORD3H-201ENST00000384486 214 ntBASIC3.23□□□□□ -1.89
SRRM4A7MD48 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SRRM4A7MD48 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SRRM4A7MD48 DHFRP6-201ENST00000401776 268 ntBASIC3.23□□□□□ -1.89
SRRM4A7MD48 MTND4P13-201ENST00000402078 1023 ntBASIC3.23□□□□□ -1.89
SRRM4A7MD48 HSPE1P12-201ENST00000412576 301 ntBASIC3.23□□□□□ -1.89
SRRM4A7MD48 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SRRM4A7MD48 RPL18P10-201ENST00000425606 538 ntBASIC3.23□□□□□ -1.89
SRRM4A7MD48 AC007742.1-201ENST00000425789 329 ntBASIC3.23□□□□□ -1.89
SRRM4A7MD48 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.23□□□□□ -1.89
SRRM4A7MD48 ELOCP26-201ENST00000436067 329 ntBASIC3.23□□□□□ -1.89
SRRM4A7MD48 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.23□□□□□ -1.89
SRRM4A7MD48 AL354941.1-201ENST00000438600 464 ntBASIC3.23□□□□□ -1.89
SRRM4A7MD48 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.23□□□□□ -1.89
SRRM4A7MD48 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.23□□□□□ -1.89
SRRM4A7MD48 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.23□□□□□ -1.89
SRRM4A7MD48 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SRRM4A7MD48 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.23□□□□□ -1.89
SRRM4A7MD48 AL109741.2-201ENST00000455561 343 ntBASIC3.23□□□□□ -1.89
SRRM4A7MD48 RPL38P1-201ENST00000460914 211 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms