Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AL592437.2-201ENST00000421655 2434 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 Y_RNA.97-201ENST00000363094 102 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 RN7SKP224-201ENST00000364140 325 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 RNU6-777P-201ENST00000364265 104 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 RNA5SP366-201ENST00000365454 123 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 RNU6-730P-201ENST00000383954 104 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AL512430.2-201ENST00000406786 339 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 RNA5SP296-201ENST00000410523 111 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 RPL17P12-201ENST00000413391 526 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 RPL26P29-201ENST00000415623 438 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AL391219.1-201ENST00000422570 483 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 RPS4XP4-201ENST00000443195 763 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 USP9YP29-201ENST00000445112 563 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AL589765.3-201ENST00000446084 462 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 BX276092.4-201ENST00000452056 248 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 FAM172BP-201ENST00000487497 1089 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AC093767.1-201ENST00000504523 156 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AC022447.3-201ENST00000506865 495 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 GNRHR2P1-201ENST00000555315 631 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AC005951.1-201ENST00000576706 485 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 MIR3611-201ENST00000584484 83 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AC007566.2-201ENST00000603642 413 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AC090186.1-201ENST00000605991 572 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AL158196.1-201ENST00000616786 434 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 AC022893.2-201ENST00000564832 3296 ntBASIC4.12□□□□□ -1.75
TCRBV7S3A2A0A539 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AL139811.1-201ENST00000424779 2299 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 RNU5F-6P-201ENST00000362979 116 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 RNU4-75P-201ENST00000364621 146 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 OR5H15-201ENST00000383696 930 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 MIR320C1-201ENST00000408566 88 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AL663109.1-201ENST00000411498 844 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 RPL23AP26-201ENST00000412728 464 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AL592293.2-201ENST00000422292 996 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 MTCO2P5-201ENST00000422621 426 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 MTND1P28-201ENST00000435623 950 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 RPL37P21-201ENST00000435890 276 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 LSM1P1-201ENST00000438629 273 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 IFNWP4-201ENST00000453148 294 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 RN7SL303P-201ENST00000469773 251 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AP000797.1-201ENST00000478870 387 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC106872.3-201ENST00000495104 446 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC109458.1-201ENST00000508858 316 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC024589.1-201ENST00000512207 263 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 MTND4LP31-201ENST00000514859 294 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 RN7SKP277-201ENST00000516895 283 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC022861.1-201ENST00000522981 663 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC022146.1-201ENST00000595307 847 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AL513477.2-201ENST00000607858 568 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC019193.2-201ENST00000610012 634 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC104073.3-201ENST00000610942 955 ntBASIC4.11□□□□□ -1.75
TCRBV7S3A2A0A539 AC010678.1-201ENST00000614118 713 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms