Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 Y_RNA.672-201ENST00000516289 104 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 PDCD5P1-201ENST00000543528 309 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 RN7SL176P-201ENST00000580352 264 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC020910.3-201ENST00000603701 874 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC107304.1-201ENST00000604229 296 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AL731566.2-201ENST00000618971 317 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC040168.1-201ENST00000623594 991 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 CR381572.2-201ENST00000624852 397 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC068137.3-201ENST00000639191 341 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC099654.13-201ENST00000639774 207 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC073869.6-201ENST00000640656 341 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC090337.1-201ENST00000579651 2074 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AL356489.2-201ENST00000566968 3528 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AL133243.3-201ENST00000617415 3004 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 AC025031.4-201ENST00000621248 3271 ntBASIC4.75□□□□□ -1.65
PCDHGA3Q9Y5H0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 MTND5P26-201ENST00000426018 1752 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 RNA5SP505-201ENST00000364748 108 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 MIR298-201ENST00000401212 88 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 SNORA77-201ENST00000408716 125 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 ARPC3P1-201ENST00000437218 533 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 OR1H1P-201ENST00000448731 937 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 GAPDHP17-201ENST00000449858 1001 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AURKAPS2-201ENST00000454983 333 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AC053481.1-201ENST00000467217 306 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 RPS3AP17-201ENST00000472594 777 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 RN7SL441P-201ENST00000492388 296 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 KCTD9P5-201ENST00000504141 1170 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 NPM1P41-201ENST00000512920 831 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AC134698.5-201ENST00000519444 336 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AC022616.6-201ENST00000520479 119 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 OR5G4P-201ENST00000525251 760 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 OR4P1P-201ENST00000530808 1136 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AC006960.3-201ENST00000561845 705 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 MTATP6P3-201ENST00000581686 676 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 MIR5096-201ENST00000583713 70 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 VN1R79P-201ENST00000593540 513 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AC068790.4-201ENST00000602474 263 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AC068790.3-201ENST00000602988 553 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 BX664608.1-201ENST00000610519 487 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AL161637.1-201ENST00000622380 412 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 AP006248.2-201ENST00000623309 592 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 MTND5P3-201ENST00000438536 1800 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 SAMMSON-226ENST00000642089 1582 ntBASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
PCDHGA3Q9Y5H0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms