Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 U1.39-201ENST00000621562 146 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 BX649567.1-201ENST00000642071 1134 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 SAGE4P-201ENST00000442271 3381 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC093831.2-201ENST00000624393 3427 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 RNU4-35P-201ENST00000362588 141 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 U3.6-201ENST00000363622 211 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 RNA5SP50-201ENST00000363731 107 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 ATP5F1P3-201ENST00000397213 657 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AC069282.1-201ENST00000411911 526 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AC007899.1-201ENST00000412776 775 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 NUP35P2-201ENST00000416748 943 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 PAICSP7-201ENST00000419829 962 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 RPL23AP69-201ENST00000431134 458 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AL513175.1-201ENST00000431492 780 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AC244505.4-201ENST00000434905 287 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 ARF4P4-201ENST00000439608 520 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 HMGB3P11-201ENST00000440127 604 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 SSXP5-201ENST00000443473 287 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 snoU13.7-201ENST00000459220 104 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AC025518.1-201ENST00000479856 347 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 SCARNA20.6-201ENST00000517251 106 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 IGKV2-26-201ENST00000518305 343 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 MTND2P26-201ENST00000528255 1029 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AC087894.1-201ENST00000538359 518 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 MIR5186-201ENST00000577504 120 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 MIR3908-201ENST00000579798 126 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AC017100.2-201ENST00000584628 355 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 MIR3922-201ENST00000585192 84 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AC008739.3-201ENST00000603262 127 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AL109620.1-201ENST00000618738 1197 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AL356321.1-201ENST00000621360 228 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AC010872.1-201ENST00000624225 675 ntBASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.06□□□□□ -1.92
TRAPPC4Q9Y296 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC107081.3-201ENST00000612715 2034 ntBASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 MTND5P19-201ENST00000424872 1794 ntBASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC138915.3-201ENST00000562908 1389 ntBASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AL122126.1-201ENST00000546905 1318 ntBASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC016716.1-201ENST00000265882 708 ntBASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 RNA5SP119-201ENST00000362715 117 ntBASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 SNORA51.4-201ENST00000364993 124 ntBASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 MIR16-1-201ENST00000385271 89 ntBASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 OR51A3P-201ENST00000413596 924 ntBASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 RPL29P29-201ENST00000448725 423 ntBASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 HMGB1P38-201ENST00000490557 577 ntBASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 RPL21P129-201ENST00000491732 478 ntBASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 TMF1P1-201ENST00000576058 373 ntBASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC067852.3-201ENST00000589177 561 ntBASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.05□□□□□ -1.92
TRAPPC4Q9Y296 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms