Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 EI24P1-201ENST00000416584 867 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 BOLA3P4-201ENST00000418151 400 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 TOMM22P1-201ENST00000418578 312 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 MTND2P16-201ENST00000419987 799 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 TCEA1P2-201ENST00000420496 906 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 HSFY1P1-201ENST00000423928 1178 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 RPL23AP16-201ENST00000441715 421 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 TRBV26-201ENST00000456572 344 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 MTCO3P2-201ENST00000457365 171 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 PLGLA-201ENST00000465668 449 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 RN7SL293P-201ENST00000481765 281 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 RPL23AP55-201ENST00000498163 452 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF6Q9Y252 MTCYBP37-201ENST00000510642 1133 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 AP004371.1-201ENST00000525240 214 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 MTCO3P15-201ENST00000526563 574 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 NDUFS5P6-201ENST00000529136 295 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 AP001317.1-201ENST00000531194 960 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 MIR3922-201ENST00000585192 84 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 AL669831.4-202ENST00000590817 238 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 AC007687.1-201ENST00000602704 304 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 AC103710.3-201ENST00000608157 948 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 AC092954.1-201ENST00000609121 445 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RNF6Q9Y252 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF6Q9Y252 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF6Q9Y252 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RNF6Q9Y252 AC130650.2-201ENST00000618736 2403 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 GABPAP-201ENST00000419271 1356 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF6Q9Y252 AC090337.1-201ENST00000579651 2074 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 SNORA31-201ENST00000362607 130 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 RNA5SP42-201ENST00000364278 115 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 RNA5SP424-201ENST00000390988 115 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 RNU6-837P-201ENST00000391056 108 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 RNA5SP56-201ENST00000410277 118 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 PTP4A1P5-201ENST00000420305 455 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 MTCO3P1-205ENST00000422088 832 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 RPL31P54-201ENST00000429803 370 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF6Q9Y252 AC099563.1-201ENST00000456086 418 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 AC010401.1-201ENST00000463867 348 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 TMED11P-201ENST00000479478 690 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 RPS4XP22-201ENST00000480755 780 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 AC069306.1-201ENST00000507006 843 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 ARL2BPP5-201ENST00000523141 481 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 MIR4666A-201ENST00000580160 79 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 AL163642.2-201ENST00000604722 1019 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 AC092628.2-201ENST00000622492 339 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 MIR4278-201ENST00000636094 69 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 AC087821.2-201ENST00000637086 450 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 U6.105-201ENST00000637379 88 ntBASIC3.37□□□□□ -1.87
RNF6Q9Y252 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF6Q9Y252 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF6Q9Y252 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF6Q9Y252 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF6Q9Y252 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF6Q9Y252 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF6Q9Y252 AL021368.2-201ENST00000606125 5352 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms