Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DPPA2P2-201ENST00000418220 897 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 RPL23AP30-201ENST00000432419 501 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 RPS29P26-201ENST00000477483 171 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 RPS27P27-201ENST00000498779 255 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 RNA5SP454-201ENST00000517231 127 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 IGKV2D-23-201ENST00000518179 286 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 SUMO2P20-201ENST00000520803 283 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 OR4R1P-201ENST00000529879 463 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 AL022099.1-201ENST00000604551 712 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 Mico1.1-201ENST00000611698 204 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 AC112255.1-201ENST00000624070 2493 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 Y_RNA.20-201ENST00000362479 113 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 RNU1-115P-201ENST00000365329 160 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 RNU6-169P-201ENST00000365336 107 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 RNU6-338P-201ENST00000383888 105 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 RNU6-38P-201ENST00000384085 107 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 RNU6-601P-201ENST00000384540 107 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 MIR1-2-201ENST00000384961 85 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 RPL10P10-201ENST00000403509 664 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 NDUFS5P1-201ENST00000405668 289 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 PRUNEP1-201ENST00000425846 705 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 PPIAP17-201ENST00000438507 471 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 RNU6-333P-201ENST00000459117 107 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 MEMO1P3-201ENST00000459811 302 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 RN7SL860P-201ENST00000473738 223 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 PPP1R11P1-201ENST00000486095 376 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 RNU6-699P-201ENST00000517081 110 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 AL137161.1-201ENST00000532231 390 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 AC126177.5-201ENST00000549599 178 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 AC012616.1-201ENST00000600294 197 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 SDR42E1P2-201ENST00000614861 481 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 MIR6133-201ENST00000617057 108 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 AP004607.9-201ENST00000618202 316 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 SDR42E1P4-201ENST00000620894 481 ntBASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
PDZRN3Q9UPQ7 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC7.09□□□□□ -1.28
PDZRN3Q9UPQ7 DNM1P47-203ENST00000571780 12667 ntBASIC7.09□□□□□ -1.28
PDZRN3Q9UPQ7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 AL121886.1-201ENST00000358609 435 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 RN7SKP145-201ENST00000363291 303 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 RNU6-1097P-201ENST00000363586 107 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 RNU6-777P-201ENST00000364265 104 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 SNORA20.2-201ENST00000383922 131 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 Y_RNA.485-201ENST00000384395 102 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 RPA2P2-201ENST00000419698 796 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 PSMA6P3-201ENST00000428242 164 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 CYCSP6-201ENST00000434498 302 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 CR769767.1-201ENST00000436337 346 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 RN7SL197P-201ENST00000466981 299 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 RN7SL808P-201ENST00000496066 299 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 TRBVA-201ENST00000498804 316 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 GLUD1P3-202ENST00000508551 200 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 RNU6-1220P-201ENST00000517126 108 ntBASIC7.08□□□□□ -1.28
PDZRN3Q9UPQ7 MYL12AP1-201ENST00000518490 515 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms