Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PTP4A1P7-201ENST00000423476 514 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC005517.2-201ENST00000424673 553 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AL357552.1-201ENST00000445254 415 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 RN7SL330P-201ENST00000469709 307 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 RN7SL807P-201ENST00000470923 297 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 TRAV31-201ENST00000502780 342 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC008427.1-201ENST00000503102 655 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC048346.1-201ENST00000510247 144 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC109471.1-201ENST00000511631 612 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC104417.1-201ENST00000523974 751 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 OR4R3P-201ENST00000525084 838 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 OR4G1P-201ENST00000588632 938 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC011492.1-201ENST00000600023 315 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 BNIP3P31-201ENST00000604515 566 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 RNU6-1192P-201ENST00000612197 107 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 RNU6-489P-201ENST00000618289 107 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AL512427.1-201ENST00000618593 349 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 C2orf27A-204ENST00000623058 969 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC126544.2-201ENST00000625174 749 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 AC106858.1-201ENST00000637497 429 ntBASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLCF1Q9UBD9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
CLCF1Q9UBD9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AC111188.2-201ENST00000529697 1387 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 Z83843.1-201ENST00000604070 3685 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AL355578.1-201ENST00000607405 1328 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 RNA5SP197-201ENST00000363357 119 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 MIR491-201ENST00000384877 84 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 U3.19-201ENST00000390893 196 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 MCTS2P-201ENST00000394552 546 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AL603865.2-201ENST00000401679 213 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 RNU6-575P-201ENST00000411326 105 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 MTCYBP24-201ENST00000420387 1106 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 BX510359.1-201ENST00000456973 237 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AP000873.1-201ENST00000463987 400 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 GAPDHP39-201ENST00000481866 979 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 RPL5P23-201ENST00000496040 868 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AC112198.1-201ENST00000505369 1220 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 RNA5SP135-201ENST00000517019 125 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 snoZ278.1-201ENST00000517059 112 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 SNORA70.24-201ENST00000517233 118 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AP003102.1-201ENST00000525638 661 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AL121576.1-201ENST00000556055 276 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 MIR4666A-201ENST00000580160 79 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 BNIP3P38-201ENST00000601117 544 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AC008121.2-201ENST00000614647 523 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 U73479.1-201ENST00000618062 168 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AC068722.2-201ENST00000618734 544 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AL138960.2-201ENST00000625145 535 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms