Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 Y_RNA.582-201ENST00000391023 95 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VTA1Q9NP79 Y_RNA.608-201ENST00000410647 95 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 FCF1P9-201ENST00000412546 282 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 GLRXP1-201ENST00000423261 334 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 BX890604.2-201ENST00000427883 474 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VTA1Q9NP79 MTND3P21-201ENST00000433774 331 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 SDCBPP1-201ENST00000440192 890 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 GDI2P2-201ENST00000445131 608 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 AL590365.1-201ENST00000450788 243 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 BX276092.4-201ENST00000452056 248 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 TPT1P7-201ENST00000458300 517 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 AC041039.1-201ENST00000485656 536 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 MTND2P33-201ENST00000506452 1031 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 AC093824.1-201ENST00000508796 343 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 PARP4P3-201ENST00000510265 317 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 MIR2116-201ENST00000517221 80 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 AP002748.2-201ENST00000528671 348 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 AC107918.3-201ENST00000533272 382 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VTA1Q9NP79 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 AC090615.1-201ENST00000577519 154 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 MTND1P15-201ENST00000579262 949 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 AC092794.1-201ENST00000612734 582 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 ZYXP1-201ENST00000617638 118 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 MIR6891-201ENST00000618788 93 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTA1Q9NP79 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 MAPK10-286ENST00000641208 8747 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTA1Q9NP79 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VTA1Q9NP79 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.04□□□□□ -1.6
VTA1Q9NP79 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VTA1Q9NP79 NUP58P1-201ENST00000502546 1738 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 ZNF734P-201ENST00000419494 1534 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 RNU1-132P-201ENST00000364300 164 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 MIR3065-201ENST00000390137 79 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VTA1Q9NP79 SNORA11F-201ENST00000408237 128 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 SNRPFP1-201ENST00000414761 252 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 OR8F1P-201ENST00000425243 930 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 RABEPKP1-201ENST00000440529 1026 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 RPL7L1P1-201ENST00000448259 785 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AL136126.1-201ENST00000473603 402 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC020890.1-201ENST00000491837 504 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC107401.1-201ENST00000503426 685 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC138853.1-201ENST00000503549 823 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 AF131216.2-201ENST00000512316 564 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC068446.3-201ENST00000555285 382 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC027807.1-201ENST00000559921 996 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC015912.2-201ENST00000571053 181 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 MTATP6P3-201ENST00000581686 676 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 VN1R85P-201ENST00000601587 426 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC107304.1-201ENST00000604229 296 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AL022154.1-201ENST00000604698 785 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AL009028.1-201ENST00000604895 802 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VTA1Q9NP79 AL390208.1-201ENST00000605885 644 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 AL596245.1-201ENST00000618994 362 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 AC073534.2-201ENST00000620377 381 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms