Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC1.85□□□□□ -2.11
LIMD2Q9BT23 AC006130.2-201ENST00000586202 326 ntBASIC1.85□□□□□ -2.11
LIMD2Q9BT23 AC006504.3-201ENST00000586818 523 ntBASIC1.85□□□□□ -2.11
LIMD2Q9BT23 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC1.85□□□□□ -2.11
LIMD2Q9BT23 HMGB1P51-201ENST00000605166 638 ntBASIC1.85□□□□□ -2.11
LIMD2Q9BT23 AC015849.2-201ENST00000605738 409 ntBASIC1.85□□□□□ -2.11
LIMD2Q9BT23 AC012557.1-201ENST00000607115 611 ntBASIC1.85□□□□□ -2.11
LIMD2Q9BT23 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.85□□□□□ -2.11
LIMD2Q9BT23 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.85□□□□□ -2.11
LIMD2Q9BT23 AC099506.2-201ENST00000623074 221 ntBASIC1.85□□□□□ -2.11
LIMD2Q9BT23 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.85□□□□□ -2.11
LIMD2Q9BT23 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.85□□□□□ -2.11
LIMD2Q9BT23 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC1.85□□□□□ -2.11
LIMD2Q9BT23 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.85□□□□□ -2.11
LIMD2Q9BT23 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LIMD2Q9BT23 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LIMD2Q9BT23 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC1.85□□□□□ -2.11
LIMD2Q9BT23 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC006378.2-201ENST00000623178 2476 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 NSRP1P1-201ENST00000444067 1693 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 SNORA14A-201ENST00000364773 135 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 RNU6-629P-201ENST00000384061 103 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 SNORD15B-201ENST00000384714 146 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 RNA5SP229-201ENST00000410809 99 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 RNU4-47P-201ENST00000410876 114 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC091286.1-201ENST00000431233 461 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 RPL36AP6-201ENST00000435770 321 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 RPL26P28-201ENST00000451325 435 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 RPS29P12-201ENST00000460178 152 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 SYPL1P1-201ENST00000473622 768 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 DSTNP2-201ENST00000504533 515 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 WBP1LP4-201ENST00000505043 344 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 RNU1-143P-201ENST00000516296 146 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC005476.1-201ENST00000554427 397 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 MIR5194-201ENST00000582634 120 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 CKS1BP3-201ENST00000600888 237 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC005229.3-201ENST00000603438 323 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 U1.23-201ENST00000610293 146 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 RNU1-68P-201ENST00000615382 146 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC015967.1-201ENST00000619893 476 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 U1.39-201ENST00000621562 146 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC039056.2-201ENST00000622261 511 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AL356490.1-201ENST00000623079 479 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC010297.1-201ENST00000623948 149 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC012442.3-202ENST00000636742 206 ntBASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
LIMD2Q9BT23 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC1.84□□□□□ -2.12
LIMD2Q9BT23 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AL672167.1-206ENST00000356293 943 ntBASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LIMD2Q9BT23 RNU6-1181P-201ENST00000384191 106 ntBASIC1.83□□□□□ -2.12
LIMD2Q9BT23 RNU6-452P-201ENST00000384406 107 ntBASIC1.83□□□□□ -2.12
LIMD2Q9BT23 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.83□□□□□ -2.12
LIMD2Q9BT23 HMGN1P24-201ENST00000412282 298 ntBASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.83□□□□□ -2.12
LIMD2Q9BT23 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC1.83□□□□□ -2.12
LIMD2Q9BT23 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AL627224.1-201ENST00000448334 444 ntBASIC1.83□□□□□ -2.12
LIMD2Q9BT23 PRSS3P4-201ENST00000453323 162 ntBASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AL445669.2-201ENST00000454425 421 ntBASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AP000705.1-201ENST00000454567 350 ntBASIC1.83□□□□□ -2.12
LIMD2Q9BT23 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AC027673.1-201ENST00000456245 405 ntBASIC1.83□□□□□ -2.12
LIMD2Q9BT23 snoU13.3-201ENST00000459441 104 ntBASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC1.83□□□□□ -2.12
LIMD2Q9BT23 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AC126121.1-201ENST00000482313 553 ntBASIC1.83□□□□□ -2.12
LIMD2Q9BT23 RPL21P13-201ENST00000488305 481 ntBASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.83□□□□□ -2.12
LIMD2Q9BT23 AC111000.2-201ENST00000507775 550 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms