Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPAS1Q99742 RPL12P25-202ENST00000598100 674 ntBASIC4.11□□□□□ -1.75
NPAS1Q99742 AC234771.5-201ENST00000600161 514 ntBASIC4.11□□□□□ -1.75
NPAS1Q99742 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPAS1Q99742 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.11□□□□□ -1.75
NPAS1Q99742 AL392088.2-201ENST00000637607 285 ntBASIC4.11□□□□□ -1.75
NPAS1Q99742 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NPAS1Q99742 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPAS1Q99742 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
NPAS1Q99742 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NPAS1Q99742 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NPAS1Q99742 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
NPAS1Q99742 NMD3P1-201ENST00000439704 1488 ntBASIC4.11□□□□□ -1.75
NPAS1Q99742 AP002001.2-201ENST00000529025 1469 ntBASIC4.11□□□□□ -1.75
NPAS1Q99742 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.11□□□□□ -1.75
NPAS1Q99742 RAD17P1-201ENST00000418130 2042 ntBASIC4.11□□□□□ -1.75
NPAS1Q99742 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
NPAS1Q99742 AL049780.3-201ENST00000624612 1583 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPAS1Q99742 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.1□□□□□ -1.75
NPAS1Q99742 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPAS1Q99742 RNU6-343P-201ENST00000364709 104 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 RHOT1P2-201ENST00000366423 333 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 RNU6-769P-201ENST00000384407 104 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 RPS3AP23-201ENST00000401762 784 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 RNA5SP39-201ENST00000411245 120 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 RPS7P13-201ENST00000413955 498 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 SNRPFP1-201ENST00000414761 252 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 RAC1P3-201ENST00000416129 580 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 Z97055.1-201ENST00000419730 712 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 ZNF885P-201ENST00000420174 1098 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.1□□□□□ -1.75
NPAS1Q99742 RPL21P91-201ENST00000429231 479 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.1□□□□□ -1.75
NPAS1Q99742 AL353748.1-201ENST00000440753 474 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.1□□□□□ -1.75
NPAS1Q99742 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 RPL23AP43-201ENST00000446445 471 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 PPIAP3-201ENST00000450588 505 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 RPL5P32-201ENST00000454085 879 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 SNRPFP4-201ENST00000456366 242 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.1□□□□□ -1.75
NPAS1Q99742 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.1□□□□□ -1.75
NPAS1Q99742 RPL21P126-201ENST00000470049 478 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.1□□□□□ -1.75
NPAS1Q99742 AC108145.1-201ENST00000503770 153 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.1□□□□□ -1.75
NPAS1Q99742 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.1□□□□□ -1.75
NPAS1Q99742 RN7SKP92-201ENST00000517266 244 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPAS1Q99742 AP002748.2-201ENST00000528671 348 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.1□□□□□ -1.75
NPAS1Q99742 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.1□□□□□ -1.75
NPAS1Q99742 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.1□□□□□ -1.75
NPAS1Q99742 AC069240.1-201ENST00000548774 375 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.1□□□□□ -1.75
NPAS1Q99742 AC084783.1-201ENST00000565846 910 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 AC137800.2-201ENST00000574375 120 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 BNIP3P8-201ENST00000597863 560 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 AL451044.1-201ENST00000604867 238 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 AC090425.2-201ENST00000608818 501 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 MIR6748-201ENST00000610433 71 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 MIR6820-201ENST00000611508 62 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 AC138932.5-201ENST00000617759 563 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.1□□□□□ -1.75
NPAS1Q99742 AC091925.2-201ENST00000625059 256 ntBASIC4.1□□□□□ -1.75
NPAS1Q99742 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.1□□□□□ -1.75
NPAS1Q99742 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
NPAS1Q99742 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.1□□□□□ -1.75
NPAS1Q99742 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPAS1Q99742 CPHL1P-201ENST00000461341 3407 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.09□□□□□ -1.75
NPAS1Q99742 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NPAS1Q99742 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NPAS1Q99742 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPAS1Q99742 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NPAS1Q99742 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
NPAS1Q99742 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.09□□□□□ -1.75
NPAS1Q99742 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.09□□□□□ -1.75
NPAS1Q99742 RNU6-1042P-201ENST00000384204 107 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 RNU6-1207P-201ENST00000384343 107 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 SNORA40.3-201ENST00000390964 122 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 Z98745.1-201ENST00000402553 494 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 Y_RNA.598-201ENST00000410480 95 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 RN7SKP56-201ENST00000410513 331 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.09□□□□□ -1.75
NPAS1Q99742 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.09□□□□□ -1.75
NPAS1Q99742 RPL36AP36-201ENST00000418616 301 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 AL139095.3-201ENST00000419672 1203 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 RPL21P32-201ENST00000419877 477 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.09□□□□□ -1.75
NPAS1Q99742 AL391219.1-201ENST00000422570 483 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 OR8F1P-201ENST00000425243 930 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 AL356583.2-201ENST00000426536 280 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.09□□□□□ -1.75
NPAS1Q99742 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.09□□□□□ -1.75
NPAS1Q99742 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.09□□□□□ -1.75
NPAS1Q99742 FAM103A2P-201ENST00000444122 354 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 Z95327.1-201ENST00000446082 482 ntBASIC4.09□□□□□ -1.75
NPAS1Q99742 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms