Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AC008126.1-201ENST00000549019 480 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 MIR7853-201ENST00000584820 132 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AP001029.3-201ENST00000588063 596 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AP002512.4-202ENST00000641599 4530 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 SAMMSON-213ENST00000641336 1521 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 RNU6-1159P-201ENST00000362933 107 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 Y_RNA.288-201ENST00000364854 92 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AL645927.1-201ENST00000396783 406 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 RN7SKP213-201ENST00000410746 298 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC104837.2-201ENST00000427236 424 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC006548.1-201ENST00000427470 102 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 RPL21P110-201ENST00000433345 446 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC090142.1-201ENST00000465776 462 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 GMFBP1-201ENST00000467831 427 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC004453.1-201ENST00000487895 408 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 RNU6-566P-201ENST00000516790 107 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC012400.1-201ENST00000518452 381 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC022080.3-201ENST00000544433 482 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC123904.2-201ENST00000548059 300 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 NCAPGP2-201ENST00000557911 754 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC069061.3-201ENST00000582254 823 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC090312.2-201ENST00000582687 378 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC011447.4-201ENST00000587562 111 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AC008814.1-201ENST00000603797 406 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 FTX_2.1-201ENST00000618816 94 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AL731566.2-201ENST00000618971 317 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AL512643.1-201ENST00000635735 524 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 OR52H1-202ENST00000641796 1061 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 AL049780.3-201ENST00000624612 1583 ntBASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NEDD1Q8NHV4 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 AC018628.1-201ENST00000624147 3819 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 Y_RNA.515-201ENST00000384535 112 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 Y_RNA.530-201ENST00000384587 101 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 MIR1182-201ENST00000408363 97 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 RN7SKP126-201ENST00000411143 300 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 AL353777.1-201ENST00000425552 326 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 NF1P3-201ENST00000457709 450 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 SNORD127-201ENST00000458892 86 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 MTCO3P44-201ENST00000510977 541 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 RNU6-1023P-201ENST00000516137 106 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 RNU6-1004P-201ENST00000516584 111 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 MIR4443-201ENST00000585052 53 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 OR10AB1P-201ENST00000609613 938 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 AC010632.3-201ENST00000611377 369 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 AC010149.2-201ENST00000637608 315 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 AC132825.6-201ENST00000638861 357 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 AL355834.1-201ENST00000556602 3965 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 AL731566.1-201ENST00000620490 1937 ntBASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
NEDD1Q8NHV4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NEDD1Q8NHV4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms