Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC141Q6ZP82 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC141Q6ZP82 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 AP006437.1-201ENST00000641440 3685 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 EIF5P1-201ENST00000400019 1231 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 TOMM20P4-201ENST00000427861 435 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 RPS12P2-201ENST00000439728 269 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 Y_RNA.638-201ENST00000459374 113 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 RPL21P18-201ENST00000469899 480 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 AC147055.1-201ENST00000509261 750 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 AC034244.2-201ENST00000514668 858 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 AP000873.5-201ENST00000533906 236 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 AC123904.3-201ENST00000547218 814 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 TRAV37-201ENST00000553906 342 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 AC012119.1-201ENST00000603184 222 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 BNIP3P10-201ENST00000605360 577 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 AC068722.2-201ENST00000618734 544 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 AP006248.2-201ENST00000623309 592 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 FRG1DP-201ENST00000635586 771 ntBASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC141Q6ZP82 RNA5SP456-201ENST00000364002 114 ntBASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 RPL23AP74-201ENST00000437246 471 ntBASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 HMGN1P5-201ENST00000448591 263 ntBASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 KLHL2P1-201ENST00000508691 521 ntBASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 MIR5092-201ENST00000583139 88 ntBASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 AL158827.2-201ENST00000602494 330 ntBASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 MIR1291-201ENST00000627649 87 ntBASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 AL691447.3-201ENST00000635020 330 ntBASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC141Q6ZP82 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 MIR504-201ENST00000385065 83 ntBASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 RNA5SP239-201ENST00000410218 129 ntBASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 AC025260.1-201ENST00000548858 430 ntBASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 AL845331.3-202ENST00000562856 261 ntBASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 AL356274.1-201ENST00000617064 410 ntBASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 Z73965.1-201ENST00000623412 2297 ntBASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 RNA5SP210-201ENST00000391034 120 ntBASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 AP002884.2-201ENST00000471647 395 ntBASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 SNORA31.1-201ENST00000515993 133 ntBASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 RNU6-1334P-201ENST00000516032 105 ntBASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 SNORA31.5-201ENST00000516190 133 ntBASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 CKS1BP7-201ENST00000522230 235 ntBASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 AC107871.2-201ENST00000612894 502 ntBASIC3.67□□□□□ -1.82
CCDC141Q6ZP82 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 RNU1-73P-201ENST00000383971 164 ntBASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 AIMP1P1-201ENST00000418670 937 ntBASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 BX276092.3-201ENST00000424182 230 ntBASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 FAM103A2P-201ENST00000444122 354 ntBASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 RPL23AP11-201ENST00000475260 469 ntBASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 RNA5SP76-201ENST00000516277 87 ntBASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 AL442163.2-201ENST00000553912 710 ntBASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 AC092079.1-201ENST00000558620 1985 ntBASIC3.66□□□□□ -1.82
CCDC141Q6ZP82 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC141Q6ZP82 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.65□□□□□ -1.82
CCDC141Q6ZP82 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC141Q6ZP82 SNORD114-30-201ENST00000364448 72 ntBASIC3.65□□□□□ -1.83
CCDC141Q6ZP82 SNORA51.4-201ENST00000364993 124 ntBASIC3.65□□□□□ -1.83
CCDC141Q6ZP82 MIR764-201ENST00000390811 85 ntBASIC3.65□□□□□ -1.83
CCDC141Q6ZP82 RNA5SP129-201ENST00000410276 118 ntBASIC3.65□□□□□ -1.83
CCDC141Q6ZP82 RNU2-6P-201ENST00000411404 190 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms