Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP41Q3LFD5 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 RNU6-1129P-201ENST00000515964 104 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 RNU1-95P-201ENST00000516357 160 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 RNU1-128P-201ENST00000516704 160 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 AC105185.1-201ENST00000518705 535 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 AC087369.1-201ENST00000520775 996 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 AL512347.1-201ENST00000566420 503 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 AL592221.1-201ENST00000605266 382 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 AC068722.2-201ENST00000618734 544 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 AP000676.3-201ENST00000623299 569 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 AC073530.2-201ENST00000623987 261 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 AC004777.1-201ENST00000624317 287 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 FAM157B-203ENST00000639350 358 ntBASIC4.16□□□□□ -1.74
USP41Q3LFD5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
USP41Q3LFD5 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP41Q3LFD5 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
USP41Q3LFD5 AC090229.1-201ENST00000590983 1609 ntBASIC4.15□□□□□ -1.74
USP41Q3LFD5 RNU6-1279P-201ENST00000383917 103 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 MIR7-3-201ENST00000384898 110 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 MIR506-201ENST00000384998 124 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 BTBD10P2-201ENST00000404779 676 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
USP41Q3LFD5 AL356131.1-201ENST00000405826 414 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 AL591419.1-201ENST00000427423 339 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
USP41Q3LFD5 YME1L1P1-201ENST00000429435 297 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
USP41Q3LFD5 AC083863.1-201ENST00000438811 231 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 RPL23AP16-201ENST00000441715 421 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 SETD6P1-201ENST00000444575 317 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
USP41Q3LFD5 SLC31A1P1-201ENST00000451221 567 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 RPL37P6-202ENST00000464216 403 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 AC087385.1-201ENST00000475062 312 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 RPL7P38-201ENST00000488396 739 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 KLRA1P-201ENST00000503499 986 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 MTCYBP37-201ENST00000510642 1133 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 MRPS33P3-201ENST00000513456 322 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 AC016065.2-201ENST00000514530 444 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 AC026403.1-201ENST00000518938 295 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 OR5AK1P-201ENST00000524837 922 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 OR4A12P-201ENST00000530847 918 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 OSBPL9P5-201ENST00000542581 171 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 AC007599.1-201ENST00000568688 1174 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 AL607023.1-201ENST00000620045 248 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 AC244100.1-202ENST00000621554 382 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 AC078883.4-201ENST00000623218 367 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 CU459211.1-201ENST00000635667 749 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP41Q3LFD5 AC007390.2-201ENST00000606229 3803 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 ZNF962P-201ENST00000443465 3140 ntBASIC4.15□□□□□ -1.75
USP41Q3LFD5 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.15□□□□□ -1.75
USP41Q3LFD5 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP41Q3LFD5 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.14□□□□□ -1.75
USP41Q3LFD5 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP41Q3LFD5 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.14□□□□□ -1.75
USP41Q3LFD5 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP41Q3LFD5 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP41Q3LFD5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP41Q3LFD5 RNA5SP119-201ENST00000362715 117 ntBASIC4.14□□□□□ -1.75
USP41Q3LFD5 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP41Q3LFD5 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP41Q3LFD5 SNORA5A-201ENST00000384111 134 ntBASIC4.14□□□□□ -1.75
USP41Q3LFD5 RPL21P17-201ENST00000397467 475 ntBASIC4.14□□□□□ -1.75
USP41Q3LFD5 MIR1284-201ENST00000408337 120 ntBASIC4.14□□□□□ -1.75
USP41Q3LFD5 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.14□□□□□ -1.75
USP41Q3LFD5 AMD1P2-201ENST00000412936 992 ntBASIC4.14□□□□□ -1.75
USP41Q3LFD5 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.14□□□□□ -1.75
USP41Q3LFD5 AL139247.1-201ENST00000422768 325 ntBASIC4.14□□□□□ -1.75
USP41Q3LFD5 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.14□□□□□ -1.75
USP41Q3LFD5 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.14□□□□□ -1.75
USP41Q3LFD5 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms