Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 HIGD1AP6-201ENST00000521833 279 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RFX4Q33E94 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.07□□□□□ -1.92
RFX4Q33E94 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.07□□□□□ -1.92
RFX4Q33E94 MTCYBP41-201ENST00000528913 1123 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 AC006518.2-201ENST00000542513 940 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.07□□□□□ -1.92
RFX4Q33E94 AC017100.2-201ENST00000584628 355 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RFX4Q33E94 AC008759.3-201ENST00000613300 508 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 AL354976.1-201ENST00000613843 387 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 AL356321.1-201ENST00000621360 228 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
RFX4Q33E94 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RFX4Q33E94 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.06□□□□□ -1.92
RFX4Q33E94 RPL21P17-201ENST00000397467 475 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 AL355615.1-201ENST00000406187 641 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RFX4Q33E94 RN7SKP159-201ENST00000410657 292 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 AL024507.1-201ENST00000412741 274 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 NDUFB4P5-201ENST00000415445 361 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 CRYBB2P1-203ENST00000415709 538 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.06□□□□□ -1.92
RFX4Q33E94 AC009237.2-201ENST00000421358 284 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RFX4Q33E94 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.06□□□□□ -1.92
RFX4Q33E94 CYCSP4-201ENST00000429682 331 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 AL445584.1-201ENST00000431451 330 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.06□□□□□ -1.92
RFX4Q33E94 AL353743.1-202ENST00000431724 1695 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 OR2B8P-201ENST00000432841 938 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 VDAC1P3-201ENST00000434069 851 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.06□□□□□ -1.92
RFX4Q33E94 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.06□□□□□ -1.92
RFX4Q33E94 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.06□□□□□ -1.92
RFX4Q33E94 SEPT14P24-201ENST00000447236 180 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 RPL7P52-201ENST00000449200 742 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 AC073387.1-201ENST00000453261 709 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 AC104308.1-201ENST00000454621 333 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 NF1P3-201ENST00000457709 450 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.06□□□□□ -1.92
RFX4Q33E94 RN7SL75P-201ENST00000461926 281 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 NAP1L1P3-201ENST00000462291 880 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 RPS17P11-201ENST00000474297 293 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 HMGB1P38-201ENST00000490557 577 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.06□□□□□ -1.92
RFX4Q33E94 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.06□□□□□ -1.92
RFX4Q33E94 AC016550.1-201ENST00000505348 785 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.06□□□□□ -1.92
RFX4Q33E94 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.06□□□□□ -1.92
RFX4Q33E94 HIGD1AP3-201ENST00000515857 278 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.06□□□□□ -1.92
RFX4Q33E94 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.06□□□□□ -1.92
RFX4Q33E94 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RFX4Q33E94 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.06□□□□□ -1.92
RFX4Q33E94 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.06□□□□□ -1.92
RFX4Q33E94 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RFX4Q33E94 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.06□□□□□ -1.92
RFX4Q33E94 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.06□□□□□ -1.92
RFX4Q33E94 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.06□□□□□ -1.92
RFX4Q33E94 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.06□□□□□ -1.92
RFX4Q33E94 AL136520.1-201ENST00000600311 1322 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 AC006023.2-201ENST00000609916 167 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 uc_338.1-201ENST00000612113 180 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 AL356274.2-201ENST00000624379 3752 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 AC093831.2-201ENST00000624393 3427 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.06□□□□□ -1.92
RFX4Q33E94 AL645937.1-201ENST00000641739 1652 ntBASIC3.06□□□□□ -1.92
RFX4Q33E94 AC116096.1-201ENST00000566804 2314 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 AL136164.4-201ENST00000625013 2135 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RFX4Q33E94 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RFX4Q33E94 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RFX4Q33E94 RNU5B-4P-201ENST00000363508 111 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 RNU6-335P-201ENST00000364563 113 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.05□□□□□ -1.92
RFX4Q33E94 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RFX4Q33E94 CYCSP19-201ENST00000411715 316 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 AC069282.1-201ENST00000411911 526 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 OR51A3P-201ENST00000413596 924 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 AC245054.2-201ENST00000415639 319 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.05□□□□□ -1.92
RFX4Q33E94 AL035246.1-201ENST00000433554 1255 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 HMGB3P6-201ENST00000444896 598 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 ARPC3P2-201ENST00000457786 533 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.05□□□□□ -1.92
RFX4Q33E94 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
RFX4Q33E94 ACTR3P3-201ENST00000480448 893 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 AC108860.1-201ENST00000484521 383 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.05□□□□□ -1.92
RFX4Q33E94 POU5F1P7-201ENST00000508759 541 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 RN7SKP116-201ENST00000516902 319 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.05□□□□□ -1.92
RFX4Q33E94 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.05□□□□□ -1.92
RFX4Q33E94 MTCO1P49-201ENST00000523429 802 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 OR4R3P-201ENST00000525084 838 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.05□□□□□ -1.92
RFX4Q33E94 AC068339.2-201ENST00000534395 618 ntBASIC3.05□□□□□ -1.92
RFX4Q33E94 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms