Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AP000936.2-201ENST00000447151 681 ntBASIC3.31□□□□□ -1.88
RFX7Q2KHR2 PTGES3P5-201ENST00000455109 434 ntBASIC3.31□□□□□ -1.88
RFX7Q2KHR2 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX7Q2KHR2 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX7Q2KHR2 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX7Q2KHR2 OR5D17P-201ENST00000531492 978 ntBASIC3.31□□□□□ -1.88
RFX7Q2KHR2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.31□□□□□ -1.88
RFX7Q2KHR2 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.31□□□□□ -1.88
RFX7Q2KHR2 AC005046.1-201ENST00000608515 625 ntBASIC3.31□□□□□ -1.88
RFX7Q2KHR2 AL049780.3-201ENST00000624612 1583 ntBASIC3.31□□□□□ -1.88
RFX7Q2KHR2 SNORA50A-202ENST00000629536 136 ntBASIC3.31□□□□□ -1.88
RFX7Q2KHR2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RFX7Q2KHR2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RFX7Q2KHR2 MAPK10-362ENST00000641864 4484 ntBASIC3.31□□□□□ -1.88
RFX7Q2KHR2 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFX7Q2KHR2 AC104446.1-201ENST00000613728 1321 ntBASIC3.3□□□□□ -1.88
RFX7Q2KHR2 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.3□□□□□ -1.88
RFX7Q2KHR2 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.3□□□□□ -1.88
RFX7Q2KHR2 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.3□□□□□ -1.88
RFX7Q2KHR2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.3□□□□□ -1.88
RFX7Q2KHR2 RN7SL297P-201ENST00000483161 293 ntBASIC3.3□□□□□ -1.88
RFX7Q2KHR2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.3□□□□□ -1.88
RFX7Q2KHR2 AC078817.1-201ENST00000492623 435 ntBASIC3.3□□□□□ -1.88
RFX7Q2KHR2 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.3□□□□□ -1.88
RFX7Q2KHR2 RNA5SP76-201ENST00000516277 87 ntBASIC3.3□□□□□ -1.88
RFX7Q2KHR2 AC018754.1-201ENST00000607486 925 ntBASIC3.3□□□□□ -1.88
RFX7Q2KHR2 AC099778.2-201ENST00000610904 211 ntBASIC3.3□□□□□ -1.88
RFX7Q2KHR2 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.3□□□□□ -1.88
RFX7Q2KHR2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.3□□□□□ -1.88
RFX7Q2KHR2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RFX7Q2KHR2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
RFX7Q2KHR2 SNORA67.4-201ENST00000384688 142 ntBASIC3.29□□□□□ -1.88
RFX7Q2KHR2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RFX7Q2KHR2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFX7Q2KHR2 RPL30P3-201ENST00000424262 333 ntBASIC3.29□□□□□ -1.88
RFX7Q2KHR2 AL035407.1-201ENST00000429211 571 ntBASIC3.29□□□□□ -1.88
RFX7Q2KHR2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.29□□□□□ -1.88
RFX7Q2KHR2 ARL5AP4-201ENST00000430731 512 ntBASIC3.29□□□□□ -1.88
RFX7Q2KHR2 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.29□□□□□ -1.88
RFX7Q2KHR2 OR4A45P-201ENST00000529954 901 ntBASIC3.29□□□□□ -1.88
RFX7Q2KHR2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.29□□□□□ -1.88
RFX7Q2KHR2 MIR4435-1-201ENST00000582552 80 ntBASIC3.29□□□□□ -1.88
RFX7Q2KHR2 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.29□□□□□ -1.88
RFX7Q2KHR2 AL035413.2-201ENST00000604801 525 ntBASIC3.29□□□□□ -1.88
RFX7Q2KHR2 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.29□□□□□ -1.88
RFX7Q2KHR2 AC005156.1-201ENST00000613371 573 ntBASIC3.29□□□□□ -1.88
RFX7Q2KHR2 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RFX7Q2KHR2 AC243829.7-201ENST00000633081 225 ntBASIC3.29□□□□□ -1.88
RFX7Q2KHR2 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFX7Q2KHR2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
RFX7Q2KHR2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFX7Q2KHR2 DCAF13P1-201ENST00000495256 1330 ntBASIC3.28□□□□□ -1.88
RFX7Q2KHR2 RNA5SP295-201ENST00000362655 121 ntBASIC3.28□□□□□ -1.88
RFX7Q2KHR2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RFX7Q2KHR2 AL356057.3-201ENST00000402607 340 ntBASIC3.28□□□□□ -1.88
RFX7Q2KHR2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
RFX7Q2KHR2 RPS20P5-201ENST00000434808 360 ntBASIC3.28□□□□□ -1.88
RFX7Q2KHR2 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.28□□□□□ -1.88
RFX7Q2KHR2 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.28□□□□□ -1.88
RFX7Q2KHR2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.28□□□□□ -1.88
RFX7Q2KHR2 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.28□□□□□ -1.88
RFX7Q2KHR2 AC067852.4-201ENST00000590314 478 ntBASIC3.28□□□□□ -1.88
RFX7Q2KHR2 AC104763.2-201ENST00000604179 382 ntBASIC3.28□□□□□ -1.88
RFX7Q2KHR2 AL139039.1-201ENST00000401900 692 ntBASIC3.27□□□□□ -1.89
RFX7Q2KHR2 RPL31P52-201ENST00000407532 367 ntBASIC3.27□□□□□ -1.89
RFX7Q2KHR2 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 BTF3P9-201ENST00000418784 283 ntBASIC3.27□□□□□ -1.89
RFX7Q2KHR2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 MRPL50P4-201ENST00000446432 475 ntBASIC3.27□□□□□ -1.89
RFX7Q2KHR2 BX276092.4-201ENST00000452056 248 ntBASIC3.27□□□□□ -1.89
RFX7Q2KHR2 AC017037.2-201ENST00000513850 890 ntBASIC3.27□□□□□ -1.89
RFX7Q2KHR2 RNA5SP282-201ENST00000516355 108 ntBASIC3.27□□□□□ -1.89
RFX7Q2KHR2 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 AL133271.1-201ENST00000538229 291 ntBASIC3.27□□□□□ -1.89
RFX7Q2KHR2 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 AC234778.2-201ENST00000566241 354 ntBASIC3.27□□□□□ -1.89
RFX7Q2KHR2 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 AC090425.2-201ENST00000608818 501 ntBASIC3.27□□□□□ -1.89
RFX7Q2KHR2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 AC010149.2-201ENST00000637608 315 ntBASIC3.27□□□□□ -1.89
RFX7Q2KHR2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 XPOTP1-201ENST00000443317 2398 ntBASIC3.27□□□□□ -1.89
RFX7Q2KHR2 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RFX7Q2KHR2 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 AL512633.1-201ENST00000399931 655 ntBASIC3.26□□□□□ -1.89
RFX7Q2KHR2 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 MTCO3P21-201ENST00000430791 643 ntBASIC3.26□□□□□ -1.89
RFX7Q2KHR2 GAPDHP27-201ENST00000447427 1020 ntBASIC3.26□□□□□ -1.89
RFX7Q2KHR2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms