Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGXB3Q12766 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGXB3Q12766 AP000857.1-201ENST00000532151 543 ntBASIC4.26□□□□□ -1.73
HMGXB3Q12766 AC021269.2-201ENST00000532318 330 ntBASIC4.26□□□□□ -1.73
HMGXB3Q12766 NPM1P35-201ENST00000533043 868 ntBASIC4.26□□□□□ -1.73
HMGXB3Q12766 AC011492.1-201ENST00000600023 315 ntBASIC4.26□□□□□ -1.73
HMGXB3Q12766 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGXB3Q12766 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HMGXB3Q12766 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.26□□□□□ -1.73
HMGXB3Q12766 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGXB3Q12766 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HMGXB3Q12766 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HMGXB3Q12766 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HMGXB3Q12766 GSTA9P-201ENST00000406231 611 ntBASIC4.26□□□□□ -1.73
HMGXB3Q12766 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGXB3Q12766 MRPL50P4-201ENST00000446432 475 ntBASIC4.26□□□□□ -1.73
HMGXB3Q12766 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.26□□□□□ -1.73
HMGXB3Q12766 RN7SL499P-201ENST00000481141 276 ntBASIC4.26□□□□□ -1.73
HMGXB3Q12766 VWA8P1-201ENST00000510889 176 ntBASIC4.26□□□□□ -1.73
HMGXB3Q12766 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.26□□□□□ -1.73
HMGXB3Q12766 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
HMGXB3Q12766 MIR5092-201ENST00000583139 88 ntBASIC4.26□□□□□ -1.73
HMGXB3Q12766 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HMGXB3Q12766 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HMGXB3Q12766 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.25□□□□□ -1.73
HMGXB3Q12766 RNA5SP502-201ENST00000362694 119 ntBASIC4.25□□□□□ -1.73
HMGXB3Q12766 PPIAP17-201ENST00000438507 471 ntBASIC4.25□□□□□ -1.73
HMGXB3Q12766 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.25□□□□□ -1.73
HMGXB3Q12766 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.25□□□□□ -1.73
HMGXB3Q12766 U7.8-201ENST00000619968 63 ntBASIC4.25□□□□□ -1.73
HMGXB3Q12766 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HMGXB3Q12766 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGXB3Q12766 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMGXB3Q12766 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGXB3Q12766 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMGXB3Q12766 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGXB3Q12766 AL512646.1-201ENST00000269395 1077 ntBASIC4.24□□□□□ -1.73
HMGXB3Q12766 U8.13-201ENST00000390842 128 ntBASIC4.24□□□□□ -1.73
HMGXB3Q12766 RAC1P3-201ENST00000416129 580 ntBASIC4.24□□□□□ -1.73
HMGXB3Q12766 USP9YP20-201ENST00000419224 558 ntBASIC4.24□□□□□ -1.73
HMGXB3Q12766 AC104090.1-201ENST00000506341 1171 ntBASIC4.24□□□□□ -1.73
HMGXB3Q12766 AC068657.1-201ENST00000520807 306 ntBASIC4.24□□□□□ -1.73
HMGXB3Q12766 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGXB3Q12766 SNRPGP18-201ENST00000553000 214 ntBASIC4.24□□□□□ -1.73
HMGXB3Q12766 MIR5007-201ENST00000583098 95 ntBASIC4.24□□□□□ -1.73
HMGXB3Q12766 BNIP3P8-201ENST00000597863 560 ntBASIC4.24□□□□□ -1.73
HMGXB3Q12766 AC104237.2-201ENST00000612456 443 ntBASIC4.24□□□□□ -1.73
HMGXB3Q12766 AL353997.5-201ENST00000618886 171 ntBASIC4.24□□□□□ -1.73
HMGXB3Q12766 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGXB3Q12766 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGXB3Q12766 AC069528.2-201ENST00000624849 1991 ntBASIC4.23□□□□□ -1.73
HMGXB3Q12766 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGXB3Q12766 EIF5P1-201ENST00000400019 1231 ntBASIC4.23□□□□□ -1.73
HMGXB3Q12766 AL355379.1-201ENST00000405542 640 ntBASIC4.23□□□□□ -1.73
HMGXB3Q12766 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGXB3Q12766 AC104389.3-201ENST00000445629 235 ntBASIC4.23□□□□□ -1.73
HMGXB3Q12766 RPL23AP49-201ENST00000492925 468 ntBASIC4.23□□□□□ -1.73
HMGXB3Q12766 HSPE1P18-201ENST00000517602 280 ntBASIC4.23□□□□□ -1.73
HMGXB3Q12766 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGXB3Q12766 VN1R9P-201ENST00000614184 867 ntBASIC4.23□□□□□ -1.73
HMGXB3Q12766 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HMGXB3Q12766 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGXB3Q12766 WWP1P1-201ENST00000466609 2769 ntBASIC4.23□□□□□ -1.73
HMGXB3Q12766 Z98742.2-201ENST00000431564 187 ntBASIC4.22□□□□□ -1.73
HMGXB3Q12766 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGXB3Q12766 AC106872.3-201ENST00000495104 446 ntBASIC4.22□□□□□ -1.73
HMGXB3Q12766 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.22□□□□□ -1.73
HMGXB3Q12766 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGXB3Q12766 AC119751.1-201ENST00000513357 765 ntBASIC4.22□□□□□ -1.73
HMGXB3Q12766 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGXB3Q12766 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGXB3Q12766 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.22□□□□□ -1.73
HMGXB3Q12766 MIR6845-201ENST00000613182 61 ntBASIC4.22□□□□□ -1.73
HMGXB3Q12766 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGXB3Q12766 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HMGXB3Q12766 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HMGXB3Q12766 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGXB3Q12766 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGXB3Q12766 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGXB3Q12766 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.21□□□□□ -1.73
HMGXB3Q12766 SNORA64-201ENST00000384674 134 ntBASIC4.21□□□□□ -1.73
HMGXB3Q12766 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HMGXB3Q12766 MORF4L1P6-201ENST00000418771 268 ntBASIC4.21□□□□□ -1.73
HMGXB3Q12766 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HMGXB3Q12766 ACTR6P1-201ENST00000514311 1104 ntBASIC4.21□□□□□ -1.73
HMGXB3Q12766 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.21□□□□□ -1.73
HMGXB3Q12766 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGXB3Q12766 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGXB3Q12766 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HMGXB3Q12766 RNU6-1159P-201ENST00000362933 107 ntBASIC4.21□□□□□ -1.74
HMGXB3Q12766 RNU6-249P-201ENST00000363016 102 ntBASIC4.21□□□□□ -1.74
HMGXB3Q12766 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGXB3Q12766 AL138878.1-201ENST00000405131 347 ntBASIC4.21□□□□□ -1.74
HMGXB3Q12766 RPS20P25-201ENST00000412447 352 ntBASIC4.21□□□□□ -1.74
HMGXB3Q12766 RPL31P45-201ENST00000419532 356 ntBASIC4.21□□□□□ -1.74
HMGXB3Q12766 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGXB3Q12766 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGXB3Q12766 VN1R17P-201ENST00000472048 1090 ntBASIC4.21□□□□□ -1.74
HMGXB3Q12766 AL109741.3-201ENST00000561748 592 ntBASIC4.21□□□□□ -1.74
HMGXB3Q12766 MIR4498-201ENST00000577599 66 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms