Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDK3Q00526 AP002907.1-201ENST00000606361 1430 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 AC018529.3-201ENST00000624212 2254 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.81□□□□□ -1.8
CDK3Q00526 RNU6-730P-201ENST00000383954 104 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 RNU6-339P-201ENST00000384310 107 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 MIR708-201ENST00000390708 88 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 ATP5F1P4-201ENST00000397288 746 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 RSL24D1P4-201ENST00000400938 484 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 MTND4LP20-201ENST00000402379 270 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 AL590704.1-201ENST00000402856 794 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 RPL23AP48-201ENST00000406913 488 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 SNORA57.3-201ENST00000411095 141 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 ELOCP18-201ENST00000434209 337 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 KCTD9P3-201ENST00000434597 1169 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 AL008629.1-201ENST00000438615 184 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 ELOCP8-201ENST00000439309 332 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 ELOCP15-201ENST00000442090 332 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.81□□□□□ -1.8
CDK3Q00526 RPS17P13-201ENST00000448974 407 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 MTND1P31-201ENST00000449206 961 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 AC104978.1-201ENST00000449387 391 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK3Q00526 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.81□□□□□ -1.8
CDK3Q00526 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.81□□□□□ -1.8
CDK3Q00526 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.81□□□□□ -1.8
CDK3Q00526 AC026410.2-201ENST00000460281 156 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK3Q00526 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK3Q00526 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK3Q00526 AC093281.2-201ENST00000510153 597 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 AC104986.1-201ENST00000517978 436 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
CDK3Q00526 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK3Q00526 OR6C73P-201ENST00000546432 358 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK3Q00526 DUXAP6-201ENST00000553858 601 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 AC090888.2-201ENST00000559765 1144 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK3Q00526 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.81□□□□□ -1.8
CDK3Q00526 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK3Q00526 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.81□□□□□ -1.8
CDK3Q00526 BNIP3P11-201ENST00000603878 563 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 AC112230.1-201ENST00000604342 547 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 RNA5SP108-201ENST00000605921 117 ntBASIC3.81□□□□□ -1.8
CDK3Q00526 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.81□□□□□ -1.8
CDK3Q00526 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK3Q00526 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CDK3Q00526 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.81□□□□□ -1.8
CDK3Q00526 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CDK3Q00526 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDK3Q00526 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
CDK3Q00526 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDK3Q00526 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.8□□□□□ -1.8
CDK3Q00526 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDK3Q00526 AF228730.1-201ENST00000397972 663 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 RPL31P1-201ENST00000398116 372 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 HSPD1P16-201ENST00000402302 394 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.8□□□□□ -1.8
CDK3Q00526 USP9YP33-201ENST00000412220 421 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 MTCYBP24-201ENST00000420387 1106 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 MTATP6P17-201ENST00000431030 672 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 USP9YP35-201ENST00000435696 412 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 MTND4P6-201ENST00000438297 472 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 AL353748.1-201ENST00000440753 474 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 NOTCH2P1-201ENST00000443481 624 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 Z95327.1-201ENST00000446082 482 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK3Q00526 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.8□□□□□ -1.8
CDK3Q00526 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.8□□□□□ -1.8
CDK3Q00526 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.8□□□□□ -1.8
CDK3Q00526 SNORA84-201ENST00000459229 133 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.8□□□□□ -1.8
CDK3Q00526 AC114981.1-201ENST00000503897 678 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK3Q00526 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK3Q00526 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CDK3Q00526 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDK3Q00526 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK3Q00526 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK3Q00526 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.8□□□□□ -1.8
CDK3Q00526 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK3Q00526 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.8□□□□□ -1.8
CDK3Q00526 AC006539.2-201ENST00000601729 572 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.8□□□□□ -1.8
CDK3Q00526 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.8□□□□□ -1.8
CDK3Q00526 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CDK3Q00526 AL079343.1-201ENST00000572358 1771 ntBASIC3.8□□□□□ -1.8
CDK3Q00526 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDK3Q00526 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CDK3Q00526 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDK3Q00526 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDK3Q00526 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDK3Q00526 LINC02471-203ENST00000641941 4752 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDK3Q00526 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDK3Q00526 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDK3Q00526 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.79□□□□□ -1.8
CDK3Q00526 ZNF542P-204ENST00000482727 1305 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms