Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RNA5SP196-201ENST00000625967 102 ntBASIC5.22□□□□□ -1.57
HERVK_113P62684 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HERVK_113P62684 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HERVK_113P62684 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HERVK_113P62684 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.22□□□□□ -1.57
HERVK_113P62684 AP002907.1-201ENST00000606361 1430 ntBASIC5.22□□□□□ -1.57
HERVK_113P62684 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.22□□□□□ -1.57
HERVK_113P62684 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HERVK_113P62684 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HERVK_113P62684 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.21□□□□□ -1.57
HERVK_113P62684 AC019072.1-201ENST00000604535 1551 ntBASIC5.21□□□□□ -1.57
HERVK_113P62684 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HERVK_113P62684 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.21□□□□□ -1.58
HERVK_113P62684 AP001273.1-201ENST00000624493 3152 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 OR11H4-201ENST00000315409 1082 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HERVK_113P62684 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HERVK_113P62684 RNU6-694P-201ENST00000364071 147 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 MIR134-201ENST00000385258 73 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 MIR92A2-201ENST00000385299 75 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 AL078604.1-201ENST00000404609 466 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 CIR1P3-201ENST00000405137 479 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.21□□□□□ -1.58
HERVK_113P62684 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.21□□□□□ -1.58
HERVK_113P62684 AC109583.1-201ENST00000432156 268 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 AL358934.1-201ENST00000432346 324 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 AC000111.3-201ENST00000433478 193 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.21□□□□□ -1.58
HERVK_113P62684 HMGB1P31-201ENST00000437242 427 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 RPS26P2-201ENST00000440331 348 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 RPL23AP43-201ENST00000446445 471 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 AL359385.1-201ENST00000456509 365 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 BTF3P5-201ENST00000457252 467 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 RNU7-136P-201ENST00000458819 69 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 RPS4XP18-201ENST00000495480 763 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.21□□□□□ -1.58
HERVK_113P62684 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.21□□□□□ -1.58
HERVK_113P62684 RNU6-528P-201ENST00000516926 100 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 OR4A12P-201ENST00000530847 918 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.21□□□□□ -1.58
HERVK_113P62684 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.21□□□□□ -1.58
HERVK_113P62684 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.21□□□□□ -1.58
HERVK_113P62684 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.21□□□□□ -1.58
HERVK_113P62684 AC093227.2-201ENST00000589357 285 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 AL592295.2-201ENST00000612578 206 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 AC025253.1-201ENST00000613623 543 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 AC092794.2-201ENST00000620933 563 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.21□□□□□ -1.58
HERVK_113P62684 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HERVK_113P62684 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HERVK_113P62684 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.21□□□□□ -1.58
HERVK_113P62684 MAPK10-349ENST00000641767 3661 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HERVK_113P62684 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HERVK_113P62684 AC009313.2-201ENST00000417893 1941 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 OR11H5P-202ENST00000641612 1325 ntBASIC5.21□□□□□ -1.58
HERVK_113P62684 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.21□□□□□ -1.58
HERVK_113P62684 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HERVK_113P62684 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HERVK_113P62684 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HERVK_113P62684 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HERVK_113P62684 PCAT14-202ENST00000627127 3935 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 SAMMSON-213ENST00000641336 1521 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 RNU1-64P-201ENST00000365443 163 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.2□□□□□ -1.58
HERVK_113P62684 SNORA48.7-201ENST00000391302 135 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HERVK_113P62684 GSTA9P-201ENST00000406231 611 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
HERVK_113P62684 RNA5SP317-201ENST00000410176 116 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 RNA5SP311-201ENST00000411290 116 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 GSTM3P2-201ENST00000412746 530 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.2□□□□□ -1.58
HERVK_113P62684 RABEPKP1-201ENST00000440529 1026 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.2□□□□□ -1.58
HERVK_113P62684 AL512326.1-201ENST00000443050 721 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 GAPDHP17-201ENST00000449858 1001 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.2□□□□□ -1.58
HERVK_113P62684 DHFRP3-201ENST00000455595 559 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 MTCO1P42-201ENST00000457379 726 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.2□□□□□ -1.58
HERVK_113P62684 TMEM251P1-201ENST00000503717 318 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 AC108078.1-201ENST00000508073 725 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 PTGES3P3-201ENST00000511479 482 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.2□□□□□ -1.58
HERVK_113P62684 RNA5SP315-201ENST00000516340 116 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 RNA5SP312-201ENST00000517068 116 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.2□□□□□ -1.58
HERVK_113P62684 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.2□□□□□ -1.58
HERVK_113P62684 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.2□□□□□ -1.58
HERVK_113P62684 RPL21P5-201ENST00000554662 472 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.2□□□□□ -1.58
HERVK_113P62684 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.2□□□□□ -1.58
HERVK_113P62684 AL133457.1-201ENST00000564251 987 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.2□□□□□ -1.58
HERVK_113P62684 AL391840.1-201ENST00000571144 367 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 AL591034.3-201ENST00000605511 685 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 AC090948.2-201ENST00000607363 564 ntBASIC5.2□□□□□ -1.58
HERVK_113P62684 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms