Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CKS1BP61024 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.2□□□□□ -2.06
CKS1BP61024 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CKS1BP61024 AL359693.1-201ENST00000614959 2407 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CKS1BP61024 ZNF271P-202ENST00000465539 1970 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.19□□□□□ -2.06
CKS1BP61024 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CKS1BP61024 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CKS1BP61024 RNA5SP197-201ENST00000363357 119 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 RN7SKP227-201ENST00000364445 330 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CKS1BP61024 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.19□□□□□ -2.06
CKS1BP61024 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CKS1BP61024 TAS2R15P-201ENST00000390674 928 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 RPS4XP7-201ENST00000406274 780 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 FAT1P1-201ENST00000406588 507 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 RN7SKP111-201ENST00000410349 271 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CKS1BP61024 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.19□□□□□ -2.06
CKS1BP61024 AL807761.1-201ENST00000417622 171 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.19□□□□□ -2.06
CKS1BP61024 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.19□□□□□ -2.06
CKS1BP61024 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.19□□□□□ -2.06
CKS1BP61024 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CKS1BP61024 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CKS1BP61024 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.19□□□□□ -2.06
CKS1BP61024 RPS15AP29-201ENST00000445539 400 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 RPL7P15-201ENST00000461190 712 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 AC114982.2-201ENST00000461396 358 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
CKS1BP61024 AC113398.2-201ENST00000507630 558 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 MTND4LP31-201ENST00000514859 294 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 RN7SKP43-201ENST00000516173 320 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 RNA5SP82-201ENST00000516707 92 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.19□□□□□ -2.06
CKS1BP61024 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CKS1BP61024 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CKS1BP61024 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.19□□□□□ -2.06
CKS1BP61024 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.19□□□□□ -2.06
CKS1BP61024 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.19□□□□□ -2.06
CKS1BP61024 RN7SL703P-201ENST00000578485 302 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 AC034102.8-201ENST00000615146 484 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 AC099506.2-201ENST00000623074 221 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.19□□□□□ -2.06
CKS1BP61024 AC139713.2-210ENST00000641741 992 ntBASIC2.19□□□□□ -2.06
CKS1BP61024 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CKS1BP61024 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CKS1BP61024 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CKS1BP61024 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
CKS1BP61024 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CKS1BP61024 PABPC1P9-201ENST00000426076 1612 ntBASIC2.18□□□□□ -2.06
CKS1BP61024 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CKS1BP61024 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CKS1BP61024 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CKS1BP61024 MIR144-201ENST00000384886 86 ntBASIC2.18□□□□□ -2.06
CKS1BP61024 RPL21P17-201ENST00000397467 475 ntBASIC2.18□□□□□ -2.06
CKS1BP61024 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.18□□□□□ -2.06
CKS1BP61024 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.18□□□□□ -2.06
CKS1BP61024 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.18□□□□□ -2.06
CKS1BP61024 MTCO3P12-201ENST00000416718 547 ntBASIC2.18□□□□□ -2.06
CKS1BP61024 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.18□□□□□ -2.06
CKS1BP61024 AC073063.1-201ENST00000434352 607 ntBASIC2.18□□□□□ -2.06
CKS1BP61024 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.18□□□□□ -2.06
CKS1BP61024 HMGB3P6-201ENST00000444896 598 ntBASIC2.18□□□□□ -2.06
CKS1BP61024 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CKS1BP61024 SBDSP1-204ENST00000453858 737 ntBASIC2.18□□□□□ -2.06
CKS1BP61024 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CKS1BP61024 RBM43P1-201ENST00000476891 1081 ntBASIC2.18□□□□□ -2.06
CKS1BP61024 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.18□□□□□ -2.06
CKS1BP61024 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.18□□□□□ -2.06
CKS1BP61024 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.18□□□□□ -2.06
CKS1BP61024 TBCAP3-201ENST00000512475 312 ntBASIC2.18□□□□□ -2.06
CKS1BP61024 AP001207.2-201ENST00000519490 539 ntBASIC2.18□□□□□ -2.06
CKS1BP61024 OR10V3P-201ENST00000525712 725 ntBASIC2.18□□□□□ -2.06
CKS1BP61024 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.18□□□□□ -2.06
CKS1BP61024 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.18□□□□□ -2.06
CKS1BP61024 MYL12BP1-201ENST00000569826 507 ntBASIC2.18□□□□□ -2.06
CKS1BP61024 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.18□□□□□ -2.06
CKS1BP61024 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.18□□□□□ -2.06
CKS1BP61024 AL162713.1-201ENST00000604480 262 ntBASIC2.18□□□□□ -2.06
CKS1BP61024 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.18□□□□□ -2.06
CKS1BP61024 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.18□□□□□ -2.06
CKS1BP61024 NF1P10-201ENST00000613227 742 ntBASIC2.18□□□□□ -2.06
CKS1BP61024 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.18□□□□□ -2.06
CKS1BP61024 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CKS1BP61024 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CKS1BP61024 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
CKS1BP61024 SNORA70.2-201ENST00000364506 135 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.17□□□□□ -2.06
CKS1BP61024 AC007064.1-201ENST00000412238 351 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.17□□□□□ -2.06
CKS1BP61024 RPL7P37-201ENST00000425095 738 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 RPL37P1-201ENST00000432310 284 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.17□□□□□ -2.06
CKS1BP61024 AL034418.1-201ENST00000448675 860 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.17□□□□□ -2.06
CKS1BP61024 AL109741.2-201ENST00000455561 343 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 AC025518.1-201ENST00000479856 347 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms