Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-639P-201ENST00000384074 107 ntBASIC5.77□□□□□ -1.49
USP11P51784 Y_RNA.445-201ENST00000384168 102 ntBASIC5.77□□□□□ -1.49
USP11P51784 RNU6-831P-201ENST00000384548 107 ntBASIC5.77□□□□□ -1.49
USP11P51784 AL645927.1-201ENST00000396783 406 ntBASIC5.77□□□□□ -1.49
USP11P51784 DHFRP6-201ENST00000401776 268 ntBASIC5.77□□□□□ -1.49
USP11P51784 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.77□□□□□ -1.49
USP11P51784 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.77□□□□□ -1.49
USP11P51784 BX323845.1-201ENST00000432417 179 ntBASIC5.77□□□□□ -1.49
USP11P51784 RPL23AP30-201ENST00000432419 501 ntBASIC5.77□□□□□ -1.49
USP11P51784 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP11P51784 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.77□□□□□ -1.49
USP11P51784 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.77□□□□□ -1.49
USP11P51784 FAM103A2P-201ENST00000444122 354 ntBASIC5.77□□□□□ -1.49
USP11P51784 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP11P51784 AC012512.1-201ENST00000446594 718 ntBASIC5.77□□□□□ -1.49
USP11P51784 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.77□□□□□ -1.49
USP11P51784 AL354714.3-201ENST00000447284 493 ntBASIC5.77□□□□□ -1.49
USP11P51784 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.77□□□□□ -1.49
USP11P51784 RPL7AP6-201ENST00000477943 801 ntBASIC5.77□□□□□ -1.49
USP11P51784 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.77□□□□□ -1.49
USP11P51784 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.77□□□□□ -1.49
USP11P51784 TTC39CP1-201ENST00000512513 755 ntBASIC5.77□□□□□ -1.49
USP11P51784 RNU6-123P-201ENST00000516163 102 ntBASIC5.77□□□□□ -1.49
USP11P51784 RN7SKP256-201ENST00000517201 314 ntBASIC5.77□□□□□ -1.49
USP11P51784 RNU6-794P-201ENST00000517261 64 ntBASIC5.77□□□□□ -1.49
USP11P51784 AC022861.1-201ENST00000522981 663 ntBASIC5.77□□□□□ -1.49
USP11P51784 AC022616.3-201ENST00000523940 148 ntBASIC5.77□□□□□ -1.49
USP11P51784 AP003072.2-201ENST00000527756 676 ntBASIC5.77□□□□□ -1.49
USP11P51784 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.77□□□□□ -1.49
USP11P51784 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP11P51784 PRPF19P1-201ENST00000584766 898 ntBASIC5.77□□□□□ -1.49
USP11P51784 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.77□□□□□ -1.49
USP11P51784 POLR3GP2-201ENST00000588366 668 ntBASIC5.77□□□□□ -1.49
USP11P51784 AC105254.2-201ENST00000603636 436 ntBASIC5.77□□□□□ -1.49
USP11P51784 AC080078.3-201ENST00000605407 463 ntBASIC5.77□□□□□ -1.49
USP11P51784 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.77□□□□□ -1.49
USP11P51784 AC084781.2-201ENST00000615568 161 ntBASIC5.77□□□□□ -1.49
USP11P51784 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.77□□□□□ -1.49
USP11P51784 AC091953.2-201ENST00000623979 160 ntBASIC5.77□□□□□ -1.49
USP11P51784 ADAM5-202ENST00000399789 1942 ntBASIC5.77□□□□□ -1.49
USP11P51784 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP11P51784 MTCO1P12-201ENST00000414273 1543 ntBASIC5.77□□□□□ -1.49
USP11P51784 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP11P51784 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
USP11P51784 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.77□□□□□ -1.49
USP11P51784 CASC19-284ENST00000642142 1868 ntBASIC5.77□□□□□ -1.49
USP11P51784 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP11P51784 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
USP11P51784 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USP11P51784 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP11P51784 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP11P51784 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP11P51784 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP11P51784 AC025125.1-201ENST00000624743 1922 ntBASIC5.76□□□□□ -1.49
USP11P51784 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP11P51784 Y_RNA.395-201ENST00000383945 109 ntBASIC5.76□□□□□ -1.49
USP11P51784 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
USP11P51784 AL035079.1-201ENST00000405210 287 ntBASIC5.76□□□□□ -1.49
USP11P51784 AL590290.1-201ENST00000405336 380 ntBASIC5.76□□□□□ -1.49
USP11P51784 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.76□□□□□ -1.49
USP11P51784 Y_RNA.615-201ENST00000410769 117 ntBASIC5.76□□□□□ -1.49
USP11P51784 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.76□□□□□ -1.49
USP11P51784 TPMTP2-201ENST00000414372 726 ntBASIC5.76□□□□□ -1.49
USP11P51784 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.76□□□□□ -1.49
USP11P51784 GJA6P-201ENST00000415117 1042 ntBASIC5.76□□□□□ -1.49
USP11P51784 AC234782.4-201ENST00000417646 1048 ntBASIC5.76□□□□□ -1.49
USP11P51784 AC007283.2-201ENST00000424739 197 ntBASIC5.76□□□□□ -1.49
USP11P51784 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.76□□□□□ -1.49
USP11P51784 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.76□□□□□ -1.49
USP11P51784 PTMAP6-201ENST00000439110 327 ntBASIC5.76□□□□□ -1.49
USP11P51784 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.76□□□□□ -1.49
USP11P51784 PPP1R2P5-201ENST00000457256 603 ntBASIC5.76□□□□□ -1.49
USP11P51784 RNU6-1208P-201ENST00000459588 107 ntBASIC5.76□□□□□ -1.49
USP11P51784 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.76□□□□□ -1.49
USP11P51784 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.76□□□□□ -1.49
USP11P51784 COX6B1P2-201ENST00000489624 230 ntBASIC5.76□□□□□ -1.49
USP11P51784 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.76□□□□□ -1.49
USP11P51784 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.76□□□□□ -1.49
USP11P51784 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.76□□□□□ -1.49
USP11P51784 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.76□□□□□ -1.49
USP11P51784 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.76□□□□□ -1.49
USP11P51784 RN7SKP147-201ENST00000517154 244 ntBASIC5.76□□□□□ -1.49
USP11P51784 AC090572.1-201ENST00000519251 160 ntBASIC5.76□□□□□ -1.49
USP11P51784 AC100784.1-201ENST00000522790 310 ntBASIC5.76□□□□□ -1.49
USP11P51784 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.76□□□□□ -1.49
USP11P51784 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.76□□□□□ -1.49
USP11P51784 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.76□□□□□ -1.49
USP11P51784 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.76□□□□□ -1.49
USP11P51784 NDUFB4P11-201ENST00000560510 395 ntBASIC5.76□□□□□ -1.49
USP11P51784 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.76□□□□□ -1.49
USP11P51784 AC019193.3-201ENST00000609144 554 ntBASIC5.76□□□□□ -1.49
USP11P51784 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP11P51784 AL627230.1-201ENST00000613077 211 ntBASIC5.76□□□□□ -1.49
USP11P51784 AL591926.8-201ENST00000616876 211 ntBASIC5.76□□□□□ -1.49
USP11P51784 AC022106.2-201ENST00000620114 757 ntBASIC5.76□□□□□ -1.49
USP11P51784 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USP11P51784 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
USP11P51784 MTND4P14-201ENST00000435799 1354 ntBASIC5.76□□□□□ -1.49
USP11P51784 TRIM51GP-201ENST00000534741 1350 ntBASIC5.76□□□□□ -1.49
USP11P51784 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms