Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC1P41238 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOBEC1P41238 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
APOBEC1P41238 AL031985.3-201ENST00000565390 2449 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
APOBEC1P41238 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.76□□□□□ -1.81
APOBEC1P41238 CR383658.2-201ENST00000547576 1525 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC1P41238 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC1P41238 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.76□□□□□ -1.81
APOBEC1P41238 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC1P41238 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC1P41238 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.76□□□□□ -1.81
APOBEC1P41238 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
APOBEC1P41238 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC1P41238 RNU6-1279P-201ENST00000383917 103 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 MIR513A2-201ENST00000385249 127 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AC007066.1-201ENST00000392902 381 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 RPL7P8-201ENST00000411964 730 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 HMGB1P11-201ENST00000413899 637 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.76□□□□□ -1.81
APOBEC1P41238 CKS1BP5-201ENST00000434172 273 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AL117351.1-201ENST00000438864 766 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.76□□□□□ -1.81
APOBEC1P41238 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.76□□□□□ -1.81
APOBEC1P41238 MTND5P14-201ENST00000441481 1267 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.76□□□□□ -1.81
APOBEC1P41238 RPL36AP33-201ENST00000450395 310 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AC005297.2-201ENST00000450430 606 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 PPIAP3-201ENST00000450588 505 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC1P41238 ZNF114P1-201ENST00000453500 292 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.76□□□□□ -1.81
APOBEC1P41238 RPL30P9-201ENST00000465586 330 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 RPL31P50-201ENST00000471002 296 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AC017015.1-201ENST00000477387 286 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 RPS4XP15-201ENST00000489210 795 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AC024589.1-201ENST00000512207 263 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.76□□□□□ -1.81
APOBEC1P41238 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.76□□□□□ -1.81
APOBEC1P41238 AP003730.1-201ENST00000524605 285 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 DEFB109D-201ENST00000529497 240 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.76□□□□□ -1.81
APOBEC1P41238 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.76□□□□□ -1.81
APOBEC1P41238 AC141257.3-201ENST00000572906 215 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.76□□□□□ -1.81
APOBEC1P41238 ROCK1P1-201ENST00000573767 549 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AC022655.2-201ENST00000577280 318 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.76□□□□□ -1.81
APOBEC1P41238 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.76□□□□□ -1.81
APOBEC1P41238 AL031985.2-201ENST00000600955 480 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 BBIP1P1-201ENST00000602999 279 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AC092354.1-201ENST00000606057 376 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AC064807.4-201ENST00000607201 407 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AC107214.2-201ENST00000608204 634 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AC073114.1-201ENST00000612027 490 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 LINC00901.1-201ENST00000617252 152 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 U73479.1-201ENST00000618062 168 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.76□□□□□ -1.81
APOBEC1P41238 Z69908.1-201ENST00000622603 247 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
APOBEC1P41238 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC1P41238 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC1P41238 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC1P41238 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.76□□□□□ -1.81
APOBEC1P41238 LARP1BP1-201ENST00000506036 1359 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 AC026951.1-201ENST00000559530 2459 ntBASIC3.76□□□□□ -1.81
APOBEC1P41238 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOBEC1P41238 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.75□□□□□ -1.81
APOBEC1P41238 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
APOBEC1P41238 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
APOBEC1P41238 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.75□□□□□ -1.81
APOBEC1P41238 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
APOBEC1P41238 RNU6-501P-201ENST00000364072 100 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 SNORD74.4-201ENST00000364129 80 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 RNA5SP513-201ENST00000364648 118 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
APOBEC1P41238 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.75□□□□□ -1.81
APOBEC1P41238 RNU6-339P-201ENST00000384310 107 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
APOBEC1P41238 AC136624.1-201ENST00000400791 413 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 AL355379.1-201ENST00000405542 640 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 RNA5SP39-201ENST00000411245 120 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 AC016397.1-201ENST00000412463 242 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.75□□□□□ -1.81
APOBEC1P41238 AC108032.1-201ENST00000416706 207 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 NPM1P11-201ENST00000417106 855 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 RPS12P23-201ENST00000419579 400 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 AC092647.1-201ENST00000420654 287 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 CHIAP3-201ENST00000423668 1133 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 PSMA6P3-201ENST00000428242 164 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.75□□□□□ -1.81
APOBEC1P41238 AL512649.1-201ENST00000428997 581 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 AC244035.1-201ENST00000430042 390 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 AC016712.1-201ENST00000431088 378 ntBASIC3.75□□□□□ -1.81
APOBEC1P41238 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.75□□□□□ -1.81
APOBEC1P41238 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.75□□□□□ -1.81
APOBEC1P41238 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.75□□□□□ -1.81
APOBEC1P41238 MUPP-201ENST00000438111 566 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms