Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 NANOGP5-201ENST00000424456 877 ntBASIC3.92□□□□□ -1.78
CLIP1P30622 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP1P30622 GAPDHP27-201ENST00000447427 1020 ntBASIC3.92□□□□□ -1.78
CLIP1P30622 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.92□□□□□ -1.78
CLIP1P30622 CEACAMP4-201ENST00000457676 421 ntBASIC3.92□□□□□ -1.78
CLIP1P30622 RPS29P21-201ENST00000496272 170 ntBASIC3.92□□□□□ -1.78
CLIP1P30622 OR5H5P-201ENST00000503164 928 ntBASIC3.92□□□□□ -1.78
CLIP1P30622 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.92□□□□□ -1.78
CLIP1P30622 RNU6-237P-201ENST00000515985 71 ntBASIC3.92□□□□□ -1.78
CLIP1P30622 AC007938.3-201ENST00000604965 623 ntBASIC3.92□□□□□ -1.78
CLIP1P30622 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP1P30622 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLIP1P30622 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.92□□□□□ -1.78
CLIP1P30622 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CLIP1P30622 AC069528.2-201ENST00000624849 1991 ntBASIC3.92□□□□□ -1.78
CLIP1P30622 AC009501.3-201ENST00000605001 1352 ntBASIC3.92□□□□□ -1.78
CLIP1P30622 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CLIP1P30622 AL445437.1-201ENST00000623157 3087 ntBASIC3.91□□□□□ -1.78
CLIP1P30622 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP1P30622 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CLIP1P30622 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.91□□□□□ -1.78
CLIP1P30622 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.91□□□□□ -1.78
CLIP1P30622 AP002884.2-201ENST00000471647 395 ntBASIC3.91□□□□□ -1.78
CLIP1P30622 RPL23AP45-201ENST00000476406 468 ntBASIC3.91□□□□□ -1.78
CLIP1P30622 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.91□□□□□ -1.78
CLIP1P30622 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.91□□□□□ -1.78
CLIP1P30622 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.91□□□□□ -1.78
CLIP1P30622 RPL23AP84-201ENST00000571193 464 ntBASIC3.91□□□□□ -1.78
CLIP1P30622 AC007423.1-201ENST00000605009 627 ntBASIC3.91□□□□□ -1.78
CLIP1P30622 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP1P30622 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.91□□□□□ -1.78
CLIP1P30622 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP1P30622 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.91□□□□□ -1.78
CLIP1P30622 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CLIP1P30622 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.91□□□□□ -1.78
CLIP1P30622 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLIP1P30622 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLIP1P30622 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.9□□□□□ -1.78
CLIP1P30622 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.9□□□□□ -1.78
CLIP1P30622 AL356320.1-201ENST00000429616 163 ntBASIC3.9□□□□□ -1.78
CLIP1P30622 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.9□□□□□ -1.78
CLIP1P30622 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.9□□□□□ -1.78
CLIP1P30622 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.9□□□□□ -1.78
CLIP1P30622 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.9□□□□□ -1.78
CLIP1P30622 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.9□□□□□ -1.78
CLIP1P30622 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.9□□□□□ -1.78
CLIP1P30622 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.9□□□□□ -1.78
CLIP1P30622 AL450472.3-201ENST00000615578 367 ntBASIC3.9□□□□□ -1.78
CLIP1P30622 MAPK10-322ENST00000641485 4530 ntBASIC3.9□□□□□ -1.79
CLIP1P30622 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.9□□□□□ -1.79
CLIP1P30622 AC006020.1-201ENST00000420179 1854 ntBASIC3.89□□□□□ -1.79
CLIP1P30622 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLIP1P30622 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.89□□□□□ -1.79
CLIP1P30622 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CLIP1P30622 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLIP1P30622 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.89□□□□□ -1.79
CLIP1P30622 CBX1P4-201ENST00000439415 457 ntBASIC3.89□□□□□ -1.79
CLIP1P30622 GSTA11P-201ENST00000452866 669 ntBASIC3.89□□□□□ -1.79
CLIP1P30622 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.89□□□□□ -1.79
CLIP1P30622 SNORA31.1-201ENST00000515993 133 ntBASIC3.89□□□□□ -1.79
CLIP1P30622 SNORA31.5-201ENST00000516190 133 ntBASIC3.89□□□□□ -1.79
CLIP1P30622 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.89□□□□□ -1.79
CLIP1P30622 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP1P30622 KC877982.1-201ENST00000602313 470 ntBASIC3.89□□□□□ -1.79
CLIP1P30622 AC002076.2-201ENST00000617362 122 ntBASIC3.89□□□□□ -1.79
CLIP1P30622 AC068722.2-201ENST00000618734 544 ntBASIC3.89□□□□□ -1.79
CLIP1P30622 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP1P30622 MIR7843-201ENST00000622274 79 ntBASIC3.89□□□□□ -1.79
CLIP1P30622 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLIP1P30622 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.89□□□□□ -1.79
CLIP1P30622 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP1P30622 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP1P30622 RWDD4P2-201ENST00000426392 563 ntBASIC3.88□□□□□ -1.79
CLIP1P30622 WASF1P1-201ENST00000447560 1131 ntBASIC3.88□□□□□ -1.79
CLIP1P30622 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP1P30622 RWDD4P1-201ENST00000488019 565 ntBASIC3.88□□□□□ -1.79
CLIP1P30622 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.88□□□□□ -1.79
CLIP1P30622 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.88□□□□□ -1.79
CLIP1P30622 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.88□□□□□ -1.79
CLIP1P30622 AC009063.1-201ENST00000563342 702 ntBASIC3.88□□□□□ -1.79
CLIP1P30622 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.88□□□□□ -1.79
CLIP1P30622 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP1P30622 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.88□□□□□ -1.79
CLIP1P30622 EXOC5P1-201ENST00000510543 1969 ntBASIC3.88□□□□□ -1.79
CLIP1P30622 XPOTP1-201ENST00000443317 2398 ntBASIC3.88□□□□□ -1.79
CLIP1P30622 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CLIP1P30622 MIR504-201ENST00000385065 83 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP1P30622 AC093151.1-201ENST00000427711 313 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 MUPP-201ENST00000438111 566 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 AC092013.1-201ENST00000438795 332 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 HIGD1AP2-201ENST00000446367 280 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 Y_RNA.638-201ENST00000459374 113 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 snoU13.15-201ENST00000459407 104 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 VN1R17P-201ENST00000472048 1090 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 RN7SL636P-201ENST00000497504 294 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP1P30622 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.87□□□□□ -1.79
CLIP1P30622 AC061975.8-201ENST00000587058 721 ntBASIC3.87□□□□□ -1.79
CLIP1P30622 VN1R78P-201ENST00000597393 564 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms