Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CXCL1P09341 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.23□□□□□ -2.05
CXCL1P09341 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CXCL1P09341 RNU6ATAC-201ENST00000408749 126 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 RNA5SP181-201ENST00000410246 98 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 RN7SKP263-201ENST00000411194 309 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 HSFY4P-201ENST00000415994 1181 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 AL513175.2-201ENST00000422071 443 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 AC073310.1-201ENST00000423226 1033 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 AJ239321.1-201ENST00000424255 564 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.23□□□□□ -2.05
CXCL1P09341 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.23□□□□□ -2.05
CXCL1P09341 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.23□□□□□ -2.05
CXCL1P09341 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.23□□□□□ -2.05
CXCL1P09341 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.23□□□□□ -2.05
CXCL1P09341 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.23□□□□□ -2.05
CXCL1P09341 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.23□□□□□ -2.05
CXCL1P09341 KLHL2P1-201ENST00000508691 521 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 AC026412.2-201ENST00000512270 1075 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.23□□□□□ -2.05
CXCL1P09341 AC008494.2-201ENST00000514544 370 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 SNORA31.1-201ENST00000515993 133 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 SNORA31.5-201ENST00000516190 133 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 AC004923.2-201ENST00000529649 369 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CXCL1P09341 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.23□□□□□ -2.05
CXCL1P09341 POLR2KP1-201ENST00000553226 168 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 BNIP3P5-201ENST00000562290 498 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.23□□□□□ -2.05
CXCL1P09341 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CXCL1P09341 TPMTP1-201ENST00000592307 737 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 DUXAP4-201ENST00000603046 613 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 AC096947.1-201ENST00000603233 470 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 AC005046.1-201ENST00000608515 625 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.23□□□□□ -2.05
CXCL1P09341 AL121772.2-201ENST00000614331 297 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 AC090897.3-201ENST00000636973 1157 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CXCL1P09341 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.23□□□□□ -2.05
CXCL1P09341 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
CXCL1P09341 ZNF807-201ENST00000328088 1707 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CXCL1P09341 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CXCL1P09341 AL136520.1-201ENST00000600311 1322 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.22□□□□□ -2.05
CXCL1P09341 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.22□□□□□ -2.05
CXCL1P09341 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.22□□□□□ -2.05
CXCL1P09341 MIR6073-201ENST00000352083 89 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 RNA5SP50-201ENST00000363731 107 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 RNU1-33P-201ENST00000364249 162 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
CXCL1P09341 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.22□□□□□ -2.05
CXCL1P09341 SFR1P1-201ENST00000403720 688 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 MTATP6P4-201ENST00000427725 675 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 AC004975.1-201ENST00000428733 208 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 RPL37P1-201ENST00000432310 284 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 SNRPEP4-201ENST00000435815 279 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.22□□□□□ -2.05
CXCL1P09341 HMGB1P15-201ENST00000453854 435 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.22□□□□□ -2.05
CXCL1P09341 AC010301.1-201ENST00000473936 355 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 AC073522.1-201ENST00000483312 377 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CXCL1P09341 CEACAMP10-202ENST00000495431 496 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.22□□□□□ -2.05
CXCL1P09341 AC111000.2-201ENST00000507775 550 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.22□□□□□ -2.05
CXCL1P09341 SNORA9.3-201ENST00000516383 129 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 AC026403.1-201ENST00000518938 295 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.22□□□□□ -2.05
CXCL1P09341 CIR1P1-201ENST00000524055 1133 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.22□□□□□ -2.05
CXCL1P09341 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.22□□□□□ -2.05
CXCL1P09341 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.22□□□□□ -2.05
CXCL1P09341 AL137847.3-201ENST00000611521 109 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 AP004607.9-201ENST00000618202 316 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 AC006249.1-201ENST00000621223 471 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 AC099506.2-201ENST00000623074 221 ntBASIC2.22□□□□□ -2.05
CXCL1P09341 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.22□□□□□ -2.05
CXCL1P09341 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CXCL1P09341 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.21□□□□□ -2.05
CXCL1P09341 Z82195.2-201ENST00000612348 18351 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.21□□□□□ -2.06
CXCL1P09341 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CXCL1P09341 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CXCL1P09341 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.21□□□□□ -2.06
CXCL1P09341 RN7SKP227-201ENST00000364445 330 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
CXCL1P09341 SNORD21-201ENST00000383953 95 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 SNORA56-201ENST00000383966 129 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 RNU4-47P-201ENST00000410876 114 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 RPL7P8-201ENST00000411964 730 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 RPS7P15-201ENST00000415804 584 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.21□□□□□ -2.06
CXCL1P09341 ATG3P1-201ENST00000419507 911 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 YPEL5P1-201ENST00000419731 367 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 UBE2V1P6-201ENST00000430840 422 ntBASIC2.21□□□□□ -2.06
CXCL1P09341 AL445584.1-201ENST00000431451 330 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms