Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
RHOP08100 AC123768.4-201ENST00000616244 701 ntBASIC4.56□□□□□ -1.68
RHOP08100 AC108479.2-201ENST00000617314 601 ntBASIC4.56□□□□□ -1.68
RHOP08100 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
RHOP08100 AC093591.3-201ENST00000634516 308 ntBASIC4.56□□□□□ -1.68
RHOP08100 OR5AK4P-201ENST00000635912 903 ntBASIC4.56□□□□□ -1.68
RHOP08100 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.56□□□□□ -1.68
RHOP08100 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
RHOP08100 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RHOP08100 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.56□□□□□ -1.68
RHOP08100 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RHOP08100 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RHOP08100 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHOP08100 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.55□□□□□ -1.68
RHOP08100 AC097504.1-201ENST00000515103 2415 ntBASIC4.55□□□□□ -1.68
RHOP08100 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.55□□□□□ -1.68
RHOP08100 GDI2P1-201ENST00000429312 1336 ntBASIC4.55□□□□□ -1.68
RHOP08100 DCAF13P1-201ENST00000495256 1330 ntBASIC4.55□□□□□ -1.68
RHOP08100 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RHOP08100 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RHOP08100 AC011155.1-201ENST00000316512 456 ntBASIC4.55□□□□□ -1.68
RHOP08100 RN7SKP226-201ENST00000364912 300 ntBASIC4.55□□□□□ -1.68
RHOP08100 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.55□□□□□ -1.68
RHOP08100 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RHOP08100 SNORA40.3-201ENST00000390964 122 ntBASIC4.55□□□□□ -1.68
RHOP08100 RPL17P50-201ENST00000396131 546 ntBASIC4.55□□□□□ -1.68
RHOP08100 AL078604.1-201ENST00000404609 466 ntBASIC4.55□□□□□ -1.68
RHOP08100 PPIAP31-201ENST00000405422 495 ntBASIC4.55□□□□□ -1.68
RHOP08100 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.55□□□□□ -1.68
RHOP08100 USP9YP13-201ENST00000417797 480 ntBASIC4.55□□□□□ -1.68
RHOP08100 GLRXP1-201ENST00000423261 334 ntBASIC4.55□□□□□ -1.68
RHOP08100 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.55□□□□□ -1.68
RHOP08100 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.55□□□□□ -1.68
RHOP08100 AL596276.1-201ENST00000434465 418 ntBASIC4.55□□□□□ -1.68
RHOP08100 AL450263.2-201ENST00000439400 589 ntBASIC4.55□□□□□ -1.68
RHOP08100 MTND6P18-201ENST00000439477 513 ntBASIC4.55□□□□□ -1.68
RHOP08100 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.55□□□□□ -1.68
RHOP08100 RPL7P36-201ENST00000444633 681 ntBASIC4.55□□□□□ -1.68
RHOP08100 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.55□□□□□ -1.68
RHOP08100 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.55□□□□□ -1.68
RHOP08100 AL033528.1-201ENST00000453780 140 ntBASIC4.55□□□□□ -1.68
RHOP08100 AC006511.1-201ENST00000470614 315 ntBASIC4.55□□□□□ -1.68
RHOP08100 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.55□□□□□ -1.68
RHOP08100 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.55□□□□□ -1.68
RHOP08100 AL358832.1-201ENST00000497800 389 ntBASIC4.55□□□□□ -1.68
RHOP08100 RPS27AP13-201ENST00000498403 237 ntBASIC4.55□□□□□ -1.68
RHOP08100 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.55□□□□□ -1.68
RHOP08100 HMGB3P16-201ENST00000508037 287 ntBASIC4.55□□□□□ -1.68
RHOP08100 MTND5P4-201ENST00000514978 288 ntBASIC4.55□□□□□ -1.68
RHOP08100 RN7SKP96-201ENST00000516948 297 ntBASIC4.55□□□□□ -1.68
RHOP08100 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.55□□□□□ -1.68
RHOP08100 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.55□□□□□ -1.68
RHOP08100 AP004247.1-201ENST00000531556 1289 ntBASIC4.55□□□□□ -1.68
RHOP08100 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.55□□□□□ -1.68
RHOP08100 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.55□□□□□ -1.68
RHOP08100 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.55□□□□□ -1.68
RHOP08100 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.55□□□□□ -1.68
RHOP08100 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.55□□□□□ -1.68
RHOP08100 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.55□□□□□ -1.68
RHOP08100 AC034105.4-201ENST00000568304 277 ntBASIC4.55□□□□□ -1.68
RHOP08100 MIR5697-201ENST00000578045 78 ntBASIC4.55□□□□□ -1.68
RHOP08100 RN7SL600P-201ENST00000581811 299 ntBASIC4.55□□□□□ -1.68
RHOP08100 MIR4637-201ENST00000582405 84 ntBASIC4.55□□□□□ -1.68
RHOP08100 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.55□□□□□ -1.68
RHOP08100 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.55□□□□□ -1.68
RHOP08100 AL161729.3-201ENST00000603533 673 ntBASIC4.55□□□□□ -1.68
RHOP08100 PRELID3BP8-201ENST00000604148 295 ntBASIC4.55□□□□□ -1.68
RHOP08100 COX6CP4-201ENST00000605798 228 ntBASIC4.55□□□□□ -1.68
RHOP08100 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.55□□□□□ -1.68
RHOP08100 AL139089.1-201ENST00000620372 975 ntBASIC4.55□□□□□ -1.68
RHOP08100 AL356321.1-201ENST00000621360 228 ntBASIC4.55□□□□□ -1.68
RHOP08100 AC112484.5-201ENST00000624189 228 ntBASIC4.55□□□□□ -1.68
RHOP08100 OR5H6-203ENST00000642105 978 ntBASIC4.55□□□□□ -1.68
RHOP08100 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHOP08100 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.55□□□□□ -1.68
RHOP08100 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHOP08100 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHOP08100 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHOP08100 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.55□□□□□ -1.68
RHOP08100 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.55□□□□□ -1.68
RHOP08100 AC095050.2-201ENST00000510748 1458 ntBASIC4.55□□□□□ -1.68
RHOP08100 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RHOP08100 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHOP08100 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.54□□□□□ -1.68
RHOP08100 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHOP08100 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.54□□□□□ -1.68
RHOP08100 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RHOP08100 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RHOP08100 AC000123.3-201ENST00000624029 4975 ntBASIC4.54□□□□□ -1.68
RHOP08100 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RHOP08100 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RHOP08100 Y_RNA.88-201ENST00000363029 99 ntBASIC4.54□□□□□ -1.68
RHOP08100 RNU6-867P-201ENST00000364956 107 ntBASIC4.54□□□□□ -1.68
RHOP08100 RNU1-63P-201ENST00000383902 164 ntBASIC4.54□□□□□ -1.68
RHOP08100 U8.14-201ENST00000390843 143 ntBASIC4.54□□□□□ -1.68
RHOP08100 RN7SKP266-201ENST00000410232 287 ntBASIC4.54□□□□□ -1.68
RHOP08100 Y_RNA.598-201ENST00000410480 95 ntBASIC4.54□□□□□ -1.68
RHOP08100 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.54□□□□□ -1.68
RHOP08100 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RHOP08100 RPL36AP36-201ENST00000418616 301 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms