Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RPL21P66-201ENST00000426566 466 ntBASIC3.17□□□□□ -1.9
P04436 AC097713.2-201ENST00000430199 356 ntBASIC3.17□□□□□ -1.9
P04436 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.17□□□□□ -1.9
P04436 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.17□□□□□ -1.9
P04436 AC234064.1-201ENST00000436312 247 ntBASIC3.17□□□□□ -1.9
P04436 AC005019.1-201ENST00000436455 431 ntBASIC3.17□□□□□ -1.9
P04436 AL662791.1-201ENST00000441992 928 ntBASIC3.17□□□□□ -1.9
P04436 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
P04436 RPL7P52-201ENST00000449200 742 ntBASIC3.17□□□□□ -1.9
P04436 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.17□□□□□ -1.9
P04436 AC104978.1-201ENST00000449387 391 ntBASIC3.17□□□□□ -1.9
P04436 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.17□□□□□ -1.9
P04436 MTCO3P35-201ENST00000485582 781 ntBASIC3.17□□□□□ -1.9
P04436 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
P04436 HMGB3P15-201ENST00000507326 574 ntBASIC3.17□□□□□ -1.9
P04436 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.17□□□□□ -1.9
P04436 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
P04436 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.17□□□□□ -1.9
P04436 RNU6-1073P-201ENST00000517182 106 ntBASIC3.17□□□□□ -1.9
P04436 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.17□□□□□ -1.9
P04436 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.17□□□□□ -1.9
P04436 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.17□□□□□ -1.9
P04436 AP000790.1-201ENST00000528891 737 ntBASIC3.17□□□□□ -1.9
P04436 DUXAP6-201ENST00000553858 601 ntBASIC3.17□□□□□ -1.9
P04436 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.17□□□□□ -1.9
P04436 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.17□□□□□ -1.9
P04436 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.17□□□□□ -1.9
P04436 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.17□□□□□ -1.9
P04436 AC104072.1-201ENST00000568817 668 ntBASIC3.17□□□□□ -1.9
P04436 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.17□□□□□ -1.9
P04436 MIR3908-201ENST00000579798 126 ntBASIC3.17□□□□□ -1.9
P04436 AC068620.3-201ENST00000602749 560 ntBASIC3.17□□□□□ -1.9
P04436 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.17□□□□□ -1.9
P04436 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
P04436 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.17□□□□□ -1.9
P04436 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.17□□□□□ -1.9
P04436 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.17□□□□□ -1.9
P04436 AC093010.3-201ENST00000570269 15214 ntBASIC3.17□□□□□ -1.9
P04436 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
P04436 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
P04436 AL645937.1-201ENST00000641739 1652 ntBASIC3.17□□□□□ -1.9
P04436 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
P04436 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.17□□□□□ -1.9
P04436 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.16□□□□□ -1.9
P04436 PWAR6-201ENST00000552334 4618 ntBASIC3.16□□□□□ -1.9
P04436 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
P04436 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
P04436 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
P04436 MIR423-201ENST00000362201 94 ntBASIC3.16□□□□□ -1.9
P04436 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
P04436 RNU6-730P-201ENST00000383954 104 ntBASIC3.16□□□□□ -1.9
P04436 RNU6-1257P-201ENST00000384625 110 ntBASIC3.16□□□□□ -1.9
P04436 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
P04436 AL603865.2-201ENST00000401679 213 ntBASIC3.16□□□□□ -1.9
P04436 AL391417.1-201ENST00000404100 426 ntBASIC3.16□□□□□ -1.9
P04436 AP000567.1-201ENST00000406413 156 ntBASIC3.16□□□□□ -1.9
P04436 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.16□□□□□ -1.9
P04436 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.16□□□□□ -1.9
P04436 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.16□□□□□ -1.9
P04436 SFR1P2-201ENST00000421841 730 ntBASIC3.16□□□□□ -1.9
P04436 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.16□□□□□ -1.9
P04436 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.16□□□□□ -1.9
P04436 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.16□□□□□ -1.9
P04436 ARF4P4-201ENST00000439608 520 ntBASIC3.16□□□□□ -1.9
P04436 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.16□□□□□ -1.9
P04436 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.16□□□□□ -1.9
P04436 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.16□□□□□ -1.9
P04436 PLGLA-201ENST00000465668 449 ntBASIC3.16□□□□□ -1.9
P04436 AC084357.1-201ENST00000473404 255 ntBASIC3.16□□□□□ -1.9
P04436 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.16□□□□□ -1.9
P04436 SETP14-201ENST00000497538 873 ntBASIC3.16□□□□□ -1.9
P04436 AC026414.1-201ENST00000504046 698 ntBASIC3.16□□□□□ -1.9
P04436 AC011352.3-201ENST00000505162 593 ntBASIC3.16□□□□□ -1.9
P04436 AC069306.1-201ENST00000507006 843 ntBASIC3.16□□□□□ -1.9
P04436 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.16□□□□□ -1.9
P04436 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
P04436 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.16□□□□□ -1.9
P04436 USP9YP5-201ENST00000511770 630 ntBASIC3.16□□□□□ -1.9
P04436 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.16□□□□□ -1.9
P04436 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.16□□□□□ -1.9
P04436 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.16□□□□□ -1.9
P04436 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.16□□□□□ -1.9
P04436 SYF2P1-201ENST00000550658 413 ntBASIC3.16□□□□□ -1.9
P04436 LSM6P2-201ENST00000552208 177 ntBASIC3.16□□□□□ -1.9
P04436 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.16□□□□□ -1.9
P04436 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.16□□□□□ -1.9
P04436 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.16□□□□□ -1.9
P04436 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.16□□□□□ -1.9
P04436 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.16□□□□□ -1.9
P04436 BNIP3P38-201ENST00000601117 544 ntBASIC3.16□□□□□ -1.9
P04436 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
P04436 AC090116.1-201ENST00000615679 446 ntBASIC3.16□□□□□ -1.9
P04436 AL512427.1-201ENST00000618593 349 ntBASIC3.16□□□□□ -1.9
P04436 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.16□□□□□ -1.9
P04436 AC139713.2-210ENST00000641741 992 ntBASIC3.16□□□□□ -1.9
P04436 AC130650.2-201ENST00000618736 2403 ntBASIC3.16□□□□□ -1.9
P04436 CR381670.1-201ENST00000624291 1693 ntBASIC3.16□□□□□ -1.9
P04436 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
P04436 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
P04436 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms